Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., Tex family protein from Rhodopseudomonas palustris CGA009

 Score =  861 bits (2224), Expect = 0.0
 Identities = 456/775 (58%), Positives = 569/775 (73%), Gaps = 17/775 (2%)

Query: 5   ICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLRE 64
           I   IA EL VR +QV AA+ L+D G+TVPFIARYRKE TG LDDTQLR L+ RL YLRE
Sbjct: 4   IASVIASELAVREQQVQAAIDLLDGGSTVPFIARYRKEATGMLDDTQLRTLEERLRYLRE 63

Query: 65  MDDRRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEP 124
           M+ RR  I+ SI++QGK+TPELE A+L ADSK RLED+YLP+K KRRTK QIA EAGLEP
Sbjct: 64  MEARRTAIIDSIKQQGKMTPELEAALLKADSKARLEDIYLPFKEKRRTKAQIAREAGLEP 123

Query: 125 LADTLWTQPNTDPESEAAKYINAE--KGVADSKAALDGARAIVMERIAEDANLLEKIRQH 182
           LAD L   P+ DP++EAA Y+ AE    VAD KAAL+GARAI++ER +E A+L   +R+ 
Sbjct: 124 LADLLLQNPDRDPQAEAAAYVKAEGEHPVADVKAALEGARAILVERFSEHADLTGSLREA 183

Query: 183 LNRNAEIVSRVIEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNADP 242
           +     + + V +GK+ AG KF DYFD  EP  K PSHR LA+LRG  E  L+L    D 
Sbjct: 184 MWSRGALKAGVRDGKQAAGAKFADYFDFSEPYEKLPSHRILALLRGEKEEVLSLDFG-DG 242

Query: 243 ELEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKERA 302
           E  ES   +  E  IA  +GI      AD +    + WAW+ +I   +  ++   + ++A
Sbjct: 243 EDPESKEPTQYENRIAATFGIARKGRPADGFLSDCVRWAWRTRIKTALALDMRMRLWQQA 302

Query: 303 EIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAPQ 362
           E EA+ VFA NL+DLL+AAPAG RATLGLDPG RTG KVAV+D TGK++   TIYPH P 
Sbjct: 303 ETEAVRVFAANLRDLLLAAPAGGRATLGLDPGFRTGVKVAVIDRTGKMVDHATIYPHEPA 362

Query: 363 HQYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIK-RGNLKVQKIMVSEAGAS 421
            +++ +M ++A L  K  ++L+AIGNGTASRET+    DL+K + +LK+ K +VSEAGAS
Sbjct: 363 RKWNESMLTLAQLCVKHRIELVAIGNGTASRETEKLVTDLMKAKPDLKLTKAIVSEAGAS 422

Query: 422 VYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLAK 481
           VYSASE A+KEFP+LDVS+RGAVSIARRLQDPL ELVK+ P+SIGVGQYQHD++Q  LA+
Sbjct: 423 VYSASEFASKEFPDLDVSIRGAVSIARRLQDPLGELVKVPPQSIGVGQYQHDLNQHALAR 482

Query: 482 RLDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVPR 541
            LDA VEDCVNAVGVD+NTASA LL RV+G+   LA NIV +RD NG F SR  LK+VPR
Sbjct: 483 ALDATVEDCVNAVGVDLNTASAPLLARVSGIGETLATNIVAHRDANGPFPSRDKLKEVPR 542

Query: 542 LGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTLR 601
           LGPKAFEQCAGFLRI DG+NPLDAS VHPE+YP+VK I      D+KALIG T+ L+ L+
Sbjct: 543 LGPKAFEQCAGFLRIRDGENPLDASGVHPESYPIVKKILAATKSDIKALIGQTKMLQGLK 602

Query: 602 AVDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSNV 661
              + DE FG+PTV+DI+KEL+KPGRDPRPEFKTATF EG+ +++DL+ GM+LE  ++NV
Sbjct: 603 PQAFADEKFGIPTVSDILKELEKPGRDPRPEFKTATFQEGVEKITDLKPGMILEATITNV 662

Query: 662 ANFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMRL 721
           A FGAF DIGVHQDGL+HISA+++R I+DPREVVK G +VKVKV+EVDV R RI L++R+
Sbjct: 663 AAFGAFADIGVHQDGLIHISAMSERRINDPREVVKPGQVVKVKVLEVDVPRNRIGLTLRM 722

Query: 722 ND---EPGQDNRSQRSAAPRSGQ--ERRAPRRDEPQGNALGGAMGGAFAAAFAKA 771
           +D    PG + RS       S +  +R  PR++ P G       GGAFAAA AKA
Sbjct: 723 SDPIPAPG-ERRSGGGGGGASAKLVDRYKPRQEAPSG-------GGAFAAALAKA 769