Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., DNA damage response protein (yhgF like) (from data) from Marinobacter adhaerens HP15

 Score =  935 bits (2416), Expect = 0.0
 Identities = 475/775 (61%), Positives = 590/775 (76%), Gaps = 5/775 (0%)

Query: 4   AICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLR 63
           +I  +IA+EL VR +QV A V L+D+G TVPFIARYRKE+TG LDD+QLRNL+ RL YLR
Sbjct: 3   SISRRIAEELGVREQQVNATVELLDEGATVPFIARYRKEITGSLDDSQLRNLEERLRYLR 62

Query: 64  EMDDRRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLE 123
           E++DRR TILKSI+EQGKLT EL+  I  AD+KNRLEDLYLPYKPKRRTK QIA EAGLE
Sbjct: 63  ELEDRRATILKSIEEQGKLTDELKATIQDADTKNRLEDLYLPYKPKRRTKAQIAREAGLE 122

Query: 124 PLADTLWTQPNTDPESEAAKYINAEKGVADSKAALDGARAIVMERIAEDANLLEKIRQHL 183
           PLAD L+  P  DPE  A  Y+N E GV D+KAALDGAR I+MER AEDA LL  +R  +
Sbjct: 123 PLADALYDDPTLDPEITAQGYLNKEAGVEDTKAALDGARYILMERFAEDAELLGSLRDFI 182

Query: 184 NRNAEIVSRVIEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNADPE 243
            +  ++   V+EGKE  G KF+DYFDH EP+ K PSHRALA+LRGRNEG L  T+     
Sbjct: 183 WQEGQLKVTVVEGKENEGAKFRDYFDHVEPLKKVPSHRALAILRGRNEGVLGYTIVVGDA 242

Query: 244 LEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKERAE 303
            ++       E  IA  + I  +   AD W  +V+ W W++K+S  +ET+LM+ ++E AE
Sbjct: 243 EDDRRAPHPAEQRIAARWNIRDNGRAADKWLSEVVRWTWRVKLSTQIETDLMAQVREAAE 302

Query: 304 IEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAPQH 363
            EAI VFA NLKDLL+ APAGPR TLGLDPGLRTG KVAV+D TG+V     I+PHAPQ+
Sbjct: 303 TEAINVFAANLKDLLLLAPAGPRPTLGLDPGLRTGVKVAVIDGTGQVAGHGAIFPHAPQN 362

Query: 364 QYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIKR-GNLKVQKIMVSEAGASV 422
           Q+DR+++ +A   +++ ++L+AIGNGTASRET+    DL KR   LK+ +I+VSE+GASV
Sbjct: 363 QWDRSIEQLAAWCREYKIELVAIGNGTASRETEKLVGDLSKRYPELKLARIVVSESGASV 422

Query: 423 YSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLAKR 482
           YSASE A+KE P+LDV++RGAVSIARRLQDPLAELVKI+PKSIGVGQYQHDVSQ  L++ 
Sbjct: 423 YSASEFASKELPDLDVTIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQVQLSRS 482

Query: 483 LDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVPRL 542
           LDA+VEDCVN VGVD+NTASA LL RV+GL+  +AQNI+++R++NG F +R  L KV RL
Sbjct: 483 LDAVVEDCVNGVGVDLNTASAPLLARVSGLNQTIAQNIIEFRNQNGMFRNRKQLLKVTRL 542

Query: 543 GPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTLRA 602
           G + FEQ AGFLRI  G+NPLD S+VHPEAY VV+ IA KN++++  +IG++ FLR L  
Sbjct: 543 GDRTFEQAAGFLRIAGGENPLDRSSVHPEAYGVVEAIARKNNREVGDIIGDSSFLRGLNP 602

Query: 603 VDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSNVA 662
            DY  E FG+PT+ DII EL+KPGRDPRPEF+ A+F EG+  +SDL+ GMVLEG V+NV 
Sbjct: 603 QDYVTEQFGLPTIKDIISELEKPGRDPRPEFRFASFEEGVETLSDLKPGMVLEGSVTNVT 662

Query: 663 NFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMRLN 722
           NFGAFVDIGVHQDGLVHISAL+  F+ DPREVVKAGDIVKVKVM+VD+ RKRIAL+MR++
Sbjct: 663 NFGAFVDIGVHQDGLVHISALSHTFVKDPREVVKAGDIVKVKVMDVDIPRKRIALTMRMD 722

Query: 723 DEPGQDNRSQRSAAPRSGQERRAPRRDEPQG----NALGGAMGGAFAAAFAKAKK 773
           D+PG+ N  +  AA RSG  R+   R+   G     +  GAM GA A A A A+K
Sbjct: 723 DQPGEKNEGKPMAANRSGASRKGGNRNAGNGGSGQKSPQGAMAGALAQALASARK 777