Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., Transcription elongation factor GreA from Pseudomonas fluorescens FW300-N2E2

 Score = 78.2 bits (191), Expect = 6e-20
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 5/154 (3%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T  G   L++E  +L K +RP ++Q +  A  LGD  ENA+Y   +     ++ RVR +
Sbjct: 8   MTVQGAKALEEEHAFLTKVERPRLSQAIGEARELGDLKENAEYHAAREEQGMVEARVRDI 67

Query: 66  SKLLPELKIVDYSP-QQEGKVFFGAWVEIEN-EAGEVKKFRIVGPEEIYGDAK-DYISID 122
              +    I+D +     GKV FG  VEI N E  E   ++IVG +E   D K   IS+ 
Sbjct: 68  EGRMQNAVIIDVTTIPHTGKVIFGTTVEIANVETDESVTYQIVGEDE--ADIKLGKISVG 125

Query: 123 SPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           SP+ARAL+ K+  +   V TP G+ E+ I  + +
Sbjct: 126 SPIARALIAKEEGDVVVVKTPGGVIEYEIVEVRH 159