Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., Transcription elongation factor GreB from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (396), Expect = 1e-43
 Identities = 82/155 (52%), Positives = 108/155 (69%), Gaps = 3/155 (1%)

Query: 3   TKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRV 62
           T LIT  G  +++ E   LW  +RP++TQ VS AA+ GDRSENA+YTY K++LR+ID RV
Sbjct: 12  TALITPEGEARMRAEFHELWHVRRPQVTQAVSEAAAQGDRSENAEYTYGKKMLREIDSRV 71

Query: 63  RFLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAK-DYISI 121
           RFL+K L  LK+V   P    KV+FGAWV +E+E G+  ++RIVGP+E+  D K + ISI
Sbjct: 72  RFLTKRLEALKVVSEKPSDPNKVYFGAWVTVEDEDGKESRYRIVGPDEL--DLKQNLISI 129

Query: 122 DSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           DSP+ARAL+ K +D E  V TPTG K  +I  I Y
Sbjct: 130 DSPLARALIGKALDAEVSVQTPTGEKRVYIVDITY 164