Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreA from Pseudomonas syringae pv. syringae B728a

 Score = 81.6 bits (200), Expect = 5e-21
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 3/153 (1%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T  G   L++EL +L K  RP+++Q +  A  LGD  ENA+Y   +     ++ R+R +
Sbjct: 6   MTVQGARALEEELTHLTKVVRPKLSQDIGTARELGDLKENAEYHAAREQQGMVEARIRDI 65

Query: 66  SKLLPELKIVDYSP-QQEGKVFFGAWVEIEN-EAGEVKKFRIVGPEEIYGDAKDYISIDS 123
              +    I+D +     GKV FG  VEI N E  E   ++IVG +E     K  IS+ S
Sbjct: 66  EGRMQNAVIIDVTTIPHTGKVIFGTTVEIANVETDESVVYQIVGEDEA-DIKKGKISVGS 124

Query: 124 PMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           P+ARAL+ K+  +   V TP+G+ E+ I  + +
Sbjct: 125 PIARALIAKEEGDVVVVKTPSGVIEYEIIEVRH 157