Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreA from Rhodopseudomonas palustris CGA009

 Score = 74.7 bits (182), Expect = 7e-19
 Identities = 56/153 (36%), Positives = 77/153 (50%), Gaps = 4/153 (2%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T +GY  L  EL +     RP I + ++ A S GD SENA+Y   K      + R+  L
Sbjct: 7   MTASGYAALSDELKHRQSVDRPRIIEHIAEARSHGDLSENAEYHAAKEEQSHNEGRINEL 66

Query: 66  SKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKK-FRIVGPEEIYGDAKD-YISIDS 123
              L    I+D S      V FGA V + +E  E K  ++IVG  E   DAK   ISI S
Sbjct: 67  EDKLARADIIDVSKLSGDTVKFGATVTLIDEDTEKKAVWQIVGEAE--ADAKKGKISITS 124

Query: 124 PMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           P+ARAL+ K+     +V  P G K + I  +E+
Sbjct: 125 PLARALIGKKAGSSVEVVAPGGAKAYEIAKVEW 157