Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcription elongation factor GreB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  207 bits (526), Expect = 9e-59
 Identities = 106/157 (67%), Positives = 124/157 (78%), Gaps = 3/157 (1%)

Query: 1   MKTKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDR 60
           MK  LITR G+  L +EL YLWKE RP+IT KV  AA+ GDRSENADYTYNKRLLRQID 
Sbjct: 1   MKAHLITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYTYNKRLLRQIDS 60

Query: 61  RVRFLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAK-DYI 119
           RVR+L K L ELKIVDYSPQQEGK++FGAW E+EN+AGE  ++RIVG +E+  D K  YI
Sbjct: 61  RVRYLVKRLEELKIVDYSPQQEGKIYFGAWFELENDAGERVRYRIVGKDEL--DTKLGYI 118

Query: 120 SIDSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           +IDSPMARAL+ KQVD+E  V TP+G K W+IN I Y
Sbjct: 119 TIDSPMARALIGKQVDDEVVVQTPSGPKAWYINEIRY 155