Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreA from Paraburkholderia graminis OAS925

 Score = 85.5 bits (210), Expect = 4e-22
 Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 3/158 (1%)

Query: 1   MKTKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDR 60
           M T  +T+ G + L+ EL  L   +RP +   ++ A + GD SENA+Y   K     I+ 
Sbjct: 1   MSTIPLTKRGADMLRDELQRLKSVERPAVINSIAEARAQGDLSENAEYDAAKEKQGFIEG 60

Query: 61  RVRFLSKLLPELKIVDYSP-QQEGKVFFGAWVEIEN-EAGEVKKFRIVGPEEIYGDAKDY 118
           R+  +   L   +++D S  + +G+V FGA VE+E+ ++G   K++IVG +E   D    
Sbjct: 61  RIAEIESKLAGAQVIDPSQVEADGRVVFGATVELEDLDSGASVKYQIVGDDEADID-HGL 119

Query: 119 ISIDSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           ISI SP+ARAL+ K   +   V  P G++E+ I ++ Y
Sbjct: 120 ISISSPIARALIGKSEGDVASVQAPGGVREYEIIAVSY 157