Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcription elongation factor GreB (RefSeq) from Shewanella sp. ANA-3

 Score =  211 bits (537), Expect = 5e-60
 Identities = 108/157 (68%), Positives = 125/157 (79%), Gaps = 3/157 (1%)

Query: 1   MKTKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDR 60
           MK  LITR G+  L +EL YLWKE RP+IT KV  AA+ GDRSENADYTYNKRLLRQID 
Sbjct: 1   MKAHLITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYTYNKRLLRQIDS 60

Query: 61  RVRFLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAK-DYI 119
           RVR+L K L ELKIVDYSPQQEGK++FGAW E+ENEAGE  ++RIVG +E+  D K  YI
Sbjct: 61  RVRYLVKRLEELKIVDYSPQQEGKIYFGAWFELENEAGECVRYRIVGKDEL--DTKLGYI 118

Query: 120 SIDSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           +IDSPMARAL+ KQVD+E  V TP+G KEW+IN I Y
Sbjct: 119 TIDSPMARALIGKQVDDEVVVQTPSGPKEWYINDIRY 155