Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Transcriptional regulatory protein ompR from Pseudomonas fluorescens FW300-N2E2

 Score =  188 bits (477), Expect = 1e-52
 Identities = 104/229 (45%), Positives = 145/229 (63%), Gaps = 3/229 (1%)

Query: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66
           VL+VDDD  +R L+  YL + G +   VA+G QM   L      L+VLD+M+PG+DGL +
Sbjct: 7   VLIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRAFLETTPVDLIVLDIMMPGDDGLVL 66

Query: 67  CRRLR-NSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVI 125
           CR LR   +   P+LMLTA+ DE DRI+GLE+GADDYL KPF  RELLARI AVLRR  +
Sbjct: 67  CRELRAGKHKATPVLMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRM 126

Query: 126 EAPGAPSAEE-TIIEFGEFRLNLGTREMFRGEEAMPLTSG-EFAVLKALVTNAREPLSRD 183
             P     E   ++ FG +RL+   R +   +  M   SG E+ +L+  + + +  L+RD
Sbjct: 127 LPPNLVVTESGRLLAFGRWRLDTTARHLLDTDGTMVALSGAEYRLLRVFLDHPQRVLNRD 186

Query: 184 KLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVF 232
           +L+N+ +GR+    +RSID+ +SRLR+ L  D  +P YI+TV   GYVF
Sbjct: 187 QLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVF 235