Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., DNA-binding response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (481), Expect = 3e-53
 Identities = 101/229 (44%), Positives = 154/229 (67%), Gaps = 2/229 (0%)

Query: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66
           +L+VDDD  + ALL ++L + G+ V   A+G  + + + R    L++LD+MLPG++GL +
Sbjct: 4   LLLVDDDLEVLALLRKFLEQHGYSVEVAADGNALWQAVQRRVPDLVILDVMLPGDNGLVL 63

Query: 67  CRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVIE 126
           C+RLR + + + I+MLTA G+  DR+VGLE+GADDYL KPF+ RELLAR+++VLRR    
Sbjct: 64  CQRLR-AEHTVGIIMLTAMGELSDRVVGLELGADDYLTKPFDARELLARVRSVLRRTGEA 122

Query: 127 APGAPSAEETIIEFGEFRLNLGTREMFRGEEAM-PLTSGEFAVLKALVTNAREPLSRDKL 185
              +  A   I+EF  ++L++  RE+   ++ M PL++GEF +L     + R  L+R +L
Sbjct: 123 RDASSDASRPILEFENWQLDVTRRELRSPDKVMIPLSAGEFELLLVFAEHPRRVLTRQQL 182

Query: 186 MNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVP 234
           +++ARG  + A +RSIDVQ+SRLRR LE D +    I+TV   GY+F P
Sbjct: 183 LDLARGETFEAFDRSIDVQVSRLRRKLETDITGASMIRTVRNSGYLFSP 231