Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., DNA-binding response regulator GltR, controls specific porins for the entry of glucose from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (481), Expect = 3e-53
 Identities = 108/243 (44%), Positives = 150/243 (61%), Gaps = 12/243 (4%)

Query: 4   NHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDG 63
           N  +L+VDDD  +R LL+ YLS  GFQVR+  +G    + L      L++LD+MLP EDG
Sbjct: 5   NKSILLVDDDQEIRELLDTYLSRAGFQVRTTPDGAGFRQALNEAPSDLVILDVMLPDEDG 64

Query: 64  LSICRRLRNSNNM--IPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLR 121
            S+CR +R       +PI+MLTA  DE DR++GLE+GADDYL KPF+PREL ARIKA+LR
Sbjct: 65  FSLCRWVRQHPRQAHVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLR 124

Query: 122 RQVI--EAPGAPSAEETIIEFGEFRLNLGTREMFR--GEEAMPLTSGEFAVLKALVTNAR 177
           R     E PG       ++ F E+RL++ +  +F   GEE + L+  +FA+LK  + + +
Sbjct: 125 RAQFGQERPGG-----EVLAFDEWRLDMVSHRLFHTDGEEVI-LSGADFALLKLFLDHPQ 178

Query: 178 EPLSRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGK 237
           E L RD + N  RGRE   ++R +D+ +SRLR+ L      PR I+TV G GY       
Sbjct: 179 EILDRDTIGNATRGRELMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYQLAASVV 238

Query: 238 AAN 240
           A+N
Sbjct: 239 ASN 241