Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  350 bits (897), Expect = e-101
 Identities = 172/234 (73%), Positives = 201/234 (85%)

Query: 3   ENHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGED 62
           E  K+L+VDDDARLR LLER+L EQG++VR+V N EQMDRLL+RE F L+VLDLM+PGED
Sbjct: 9   EGEKILIVDDDARLRRLLERFLDEQGYRVRTVENTEQMDRLLSRELFQLVVLDLMMPGED 68

Query: 63  GLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRR 122
           GLS CRRLR  NN IPI+MLTAKGDE  RI GLE GADDYL KPFNPRELLARI+AVLRR
Sbjct: 69  GLSACRRLREGNNQIPIIMLTAKGDEASRIQGLEQGADDYLAKPFNPRELLARIRAVLRR 128

Query: 123 QVIEAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSR 182
           Q  + PGAP++E+  + FGE+ L+L TRE+ +G E   LT+GEFAVLKALV +AREPL+R
Sbjct: 129 QAPQVPGAPASEDETVTFGEYELSLATRELKKGNEVHMLTTGEFAVLKALVQHAREPLTR 188

Query: 183 DKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDG 236
           DKLMN+ARGRE+ A+ERSIDVQISRLRR++E DPSKPRYIQTVWG+GYVFVPDG
Sbjct: 189 DKLMNLARGREWDALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDG 242