Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., two component transcriptional regulator, winged helix family from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (507), Expect = 3e-56
 Identities = 110/228 (48%), Positives = 153/228 (67%), Gaps = 6/228 (2%)

Query: 6   KVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLS 65
           + L+VDDD  +R LL  YL+      R V +G QM + LT E F ++VLDLMLPGEDGLS
Sbjct: 31  RALIVDDDVAIRELLCDYLTRFNINARGVTDGTQMRQALTDETFDVVVLDLMLPGEDGLS 90

Query: 66  ICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVI 125
           +CR LR++++ IPILMLTA+ +  DRI+GLE+GADDY+ KPF PREL+ARI+ +LRR   
Sbjct: 91  LCRWLRSTSD-IPILMLTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVRD 149

Query: 126 EAPGAPSAEETIIEFGEFRLNLGTREMFRGEE-AMPLTSGEFAVLKALVTNAREPLSRDK 184
           E     S + T I F  +RLN   R++   +   +PL++ EF +L+  +      LSR++
Sbjct: 150 ER----SDQRTTIRFDAWRLNSVLRQLTAADGLVVPLSNAEFRLLRVFLERPHRVLSREQ 205

Query: 185 LMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVF 232
           L++ ARGR   A +RSID+ +SRLR+ L  DP  P+ I+TV G GY+F
Sbjct: 206 LLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGEGYLF 253