Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  305 bits (781), Expect = 5e-88
 Identities = 156/240 (65%), Positives = 189/240 (78%), Gaps = 3/240 (1%)

Query: 1   MVEN-HKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLP 59
           M EN  ++LVVDDD RLR LL RYL EQGF V++  N   MD+LL RE F L+VLDLMLP
Sbjct: 1   MSENKQRILVVDDDQRLRDLLLRYLGEQGFVVKTAENAPAMDKLLARETFDLLVLDLMLP 60

Query: 60  GEDGLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAV 119
           GEDGLSICRRLR ++    +LMLTAKGDEIDRIVGLE+GADDYLPKPFNPREL+ARI AV
Sbjct: 61  GEDGLSICRRLRAADPHQAVLMLTAKGDEIDRIVGLEMGADDYLPKPFNPRELVARIHAV 120

Query: 120 LRRQVIEAPGAPSAEETIIEFGEFRLNLGTREMFRGE--EAMPLTSGEFAVLKALVTNAR 177
           LRR+ +  PG+P   E  ++ GE  ++L TR + RG   EA+ LT+GEFAVLK L+ + R
Sbjct: 121 LRRRALPPPGSPVEAEGTVQVGEISIDLATRRLTRGAEGEAVMLTTGEFAVLKVLLQHPR 180

Query: 178 EPLSRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGK 237
           +PLSRD+LM++ARGRE    +R+IDVQISRLR+++E DP  PRYIQTVWG GYVFVPDG+
Sbjct: 181 QPLSRDRLMSLARGREQGPFDRAIDVQISRLRKLIEPDPQTPRYIQTVWGFGYVFVPDGQ 240