Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., transcriptional regulatory protein OmpR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  377 bits (969), Expect = e-110
 Identities = 185/236 (78%), Positives = 209/236 (88%)

Query: 3   ENHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGED 62
           E  K+LVVDDD RLRALLERYL EQG+QVRS AN EQMDRLL RENFHL+VLDLMLPGED
Sbjct: 4   ETSKILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGED 63

Query: 63  GLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRR 122
           GLSICRRLR   + IPI+MLTAKGDE+DRI+GLE+GADDYLPKPFNPRELLARIKAV+RR
Sbjct: 64  GLSICRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRR 123

Query: 123 QVIEAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSR 182
           Q  + PGAP+ +E  I FGEF L+L TREM+ G+EA+ LTSGEFAVLK LVT+ REPLSR
Sbjct: 124 QTQDVPGAPAQQEAEIRFGEFSLDLATREMYHGDEAIVLTSGEFAVLKVLVTHPREPLSR 183

Query: 183 DKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGKA 238
           DKLMN+ARGR+YSA+ERSIDVQ+SRLRR++E DP+ PRYIQTVWGLGYVFVPDG A
Sbjct: 184 DKLMNLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVFVPDGAA 239