Pairwise Alignments

Query, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., ATP-dependent DNA helicase RecG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  892 bits (2304), Expect = 0.0
 Identities = 443/688 (64%), Positives = 539/688 (78%)

Query: 5   LSAVPLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQ 64
           +  VP+ EL GV  +VAEKL K+G+ TVQDLLFHLPLRYEDRT++YPI  L  G +  ++
Sbjct: 1   MDLVPITELKGVAKRVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGNYGTIE 60

Query: 65  GKVMAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKRGNQG 124
            ++ +   L G+++ML   + D  G+++LRFFNF+ A +N    G  + AYGEI+RGN  
Sbjct: 61  AEIQSTQILQGRKRMLVCNVRDNTGSMSLRFFNFSMAQRNAMQNGLMIRAYGEIRRGNHQ 120

Query: 125 LEIIHPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLPS 184
            EI+HP+YK   P +   +   LTP+YPTTEGL+Q +   LT+QAL LLE   + ELLP+
Sbjct: 121 AEIVHPEYKIVYPGEDIHLSDTLTPIYPTTEGLKQASWIKLTEQALELLEDGGLTELLPA 180

Query: 185 GLYDQQMTLAQALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQGQQ 244
            L    M+L QAL+ +HRP A I     E G+HPAQ RL+ EELLA NLSML +R +   
Sbjct: 181 DLQPNNMSLKQALQTLHRPHAGISQFDLELGQHPAQQRLVQEELLAHNLSMLRLRQRSNL 240

Query: 245 DVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLV 304
           D A+ +    QL    L  LPF PT AQQRVVAEI  DLA+PHPMMRLVQGDVGSGKTLV
Sbjct: 241 DAAVTMHATGQLLNPFLTSLPFKPTGAQQRVVAEIGKDLAQPHPMMRLVQGDVGSGKTLV 300

Query: 305 AALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETELA 364
           AALAA++AIE+GYQVA+MAPTELLAEQHA NFA W EP+G++VGWLAGKLKGKAR   LA
Sbjct: 301 AALAALQAIENGYQVAMMAPTELLAEQHAANFAAWFEPLGLKVGWLAGKLKGKARAQSLA 360

Query: 365 RIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLI 424
            I SG  ++V+GTHA+FQ+QV F  LAL+IIDEQHRFGVHQR+ LREKG  QG +PHQLI
Sbjct: 361 DIESGAAQIVIGTHAIFQQQVIFHKLALIIIDEQHRFGVHQRMGLREKGINQGFHPHQLI 420

Query: 425 MTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNEGKQ 484
           MTATPIPRTLAMTAYADL+TS+IDELPPGRTP+ TVAIPD++R+E++ER+R++ + + +Q
Sbjct: 421 MTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIPDSRRNEVLERVRNSVITDKRQ 480

Query: 485 AYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNELH 544
           AYWVCTLI+ESEVLE QAA +TAEEL++ LPE+ IGLVHGRMK AEKQ +M  FK   ++
Sbjct: 481 AYWVCTLIEESEVLECQAAEDTAEELRQALPELTIGLVHGRMKSAEKQKIMADFKAGTIN 540

Query: 545 LLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAPLSKT 604
           LLVATTVIEVGVDVPN+SLMIIENPERLGLAQLHQLRGRVGRG VASHCVLL+ APLS+T
Sbjct: 541 LLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKAPLSQT 600

Query: 605 AQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQVQRIA 664
           A +RL VLR+SNDGFVIAQ+DLEIRGPGE+LGTKQTGLA+ KIADLVRDQ L+P +Q++A
Sbjct: 601 ASQRLNVLRQSNDGFVIAQKDLEIRGPGEVLGTKQTGLAELKIADLVRDQALIPHIQKLA 660

Query: 665 RHIHERYPQNAQAIIDRWLGERDIYAKA 692
            H+  + P    AII RWLG R  Y +A
Sbjct: 661 NHVMSQAPDAVDAIIHRWLGHRQQYVQA 688