Pairwise Alignments

Query, 705 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Shewanella loihica PV-4

 Score =  408 bits (1048), Expect = e-118
 Identities = 232/662 (35%), Positives = 375/662 (56%), Gaps = 31/662 (4%)

Query: 55  ILAEMRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLDK---LKFRDR 111
           ILA + +D+ETLQAA++  V +   +T+E +   FG  +  LV+ V  +D    LK  ++
Sbjct: 64  ILAPLNMDIETLQAAVIFVVFDAGLMTEEQMLELFGDKLTTLVNSVVTMDAIGALKVNEQ 123

Query: 112 K---EAQAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYAP 168
               E Q +N RKM+LAMV+D+R ++IKLA+R   +R +     + +  +ARE  +IYAP
Sbjct: 124 SRNAEPQIDNIRKMLLAMVEDVRAVVIKLAERICLLREVKNADEETRVLLAREIADIYAP 183

Query: 169 LAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVG 228
           LA+RLGI  +K ELE++ F  L+P+ Y+ + + +   R +R+  I+   ++++ RL E  
Sbjct: 184 LANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRMDREIYIENFVNQLQQRLDEEQ 243

Query: 229 LPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRP 288
           + A+V GR K+++SI+ KM+ K+  F  + D+ A RIV +    CY  LG VH+L+   P
Sbjct: 244 IRAKVYGRPKHIYSIWKKMRGKDLTFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIP 303

Query: 289 ARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYKANSERG 348
               DY+A PK NGYQS+HT +VGP G  VE+QIRTE M + A+ GVAAHW YK  +  G
Sbjct: 304 KEFDDYVANPKPNGYQSIHTIVVGPEGKTVEIQIRTEQMHEDAELGVAAHWKYKEGT-TG 362

Query: 349 GTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLFPDEIYVFTPKGRIVELPMGATAV 408
             +   +   W++ +L+ Q+    S   ++ V+S +F D  YVFTP G +V+LPMG+T +
Sbjct: 363 KQSGYEEKINWLRKILQWQEDVAESGNLVDEVRSQVFEDRAYVFTPNGDVVDLPMGSTVL 422

Query: 409 DFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTVEIISAPGARPNAAWLN----YVVT 464
           DFAY +H+ +G+ C+GA+VD    P +  +++G+ VEII++    P   WLN    Y+  
Sbjct: 423 DFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERVEIITSKHPNPKRDWLNPNLGYIKA 482

Query: 465 SRARTKIRQVLKTMRREDSITLGRRLLNHALGEHSVNEIAPENISKVLSDLKIASMDDLL 524
           SR R+KI+   K   R+ +I  GR +L   L     + +  ++    +    +  MDDLL
Sbjct: 483 SRTRSKIQHWFKQQDRDKNIVAGREMLEAELAR---SGLTLKDAHSAVERFNMVGMDDLL 539

Query: 525 AAIG-----LGELMSIVIARRLLGNADE---------LTEPSKSGGNKNKLPIRGAEGIL 570
           A IG     L ++++ V +R  +    E           +   +G  K ++ + G   +L
Sbjct: 540 AGIGGGDVRLNQVVNHVQSRMRVNEVSEEEALEDLLKKNQARATGKGKGQVEVNGVGNLL 599

Query: 571 LTFANCCHPIPDDHIIAHVSPGRGLVVHRETCPNVRGYQK-EPDKYMAVEWTKDYDQEFI 629
              A CC P+P D I   ++ GRG+ VHR  C  V+   +  P++ + V W ++Y   + 
Sbjct: 600 SHIAKCCQPVPGDEIFGFITKGRGISVHRADCEQVKELMRVHPERSVDVVWGENYSGGYK 659

Query: 630 TELKVDMHNRQGALAELTNVISKTGSNIHGLSTEERDGRLYTVTVLLTTKDRVHLAGIMR 689
            +LKV  ++R G L +LT+V++   SN+  +S+   D +  T  + L   +  +L G+ R
Sbjct: 660 LKLKVLANDRSGLLRDLTSVLAAEKSNVLAMSSSS-DVKTQTAAIELEL-ELYNLEGLSR 717

Query: 690 KI 691
            I
Sbjct: 718 VI 719