Pairwise Alignments

Query, 705 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Shewanella sp. ANA-3

 Score =  424 bits (1090), Expect = e-123
 Identities = 237/674 (35%), Positives = 387/674 (57%), Gaps = 29/674 (4%)

Query: 55  ILAEMRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLD-----KLKFR 109
           ILA + +D+ETLQAA+L  V +   + +E +   FG  +A LV  V  +D     K+   
Sbjct: 64  ILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMDAIGALKINPN 123

Query: 110 DRK-EAQAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYAP 168
            R  E Q +N R+M+LAMV+D+R ++IKLA+R   +R +     + +  +ARE  +IYAP
Sbjct: 124 SRSSEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLAREIADIYAP 183

Query: 169 LAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVG 228
           LA+RLGI  +K ELE++ F  L+P+ Y+ + + +   R +R+  I++   +++ RL E  
Sbjct: 184 LANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRLDREVYIEKFVEQLQQRLDEDH 243

Query: 229 LPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRP 288
           + A+V GR K+++SI+ KMK K  +F  + D+ A RIV +    CY  LG VH+L+   P
Sbjct: 244 IRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIP 303

Query: 289 ARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYKANSERG 348
               DY+A PK NGYQS+HT +VGP G  VE+QIRT+DM + A+ GVAAHW YK  +  G
Sbjct: 304 REFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKEGNHSG 363

Query: 349 GTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLFPDEIYVFTPKGRIVELPMGATAV 408
             +   +   W++ +L+ Q+    S   +E V+S +F D +YVFTP G +V+LP+G+T +
Sbjct: 364 KQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVFEDRVYVFTPSGEVVDLPLGSTVL 423

Query: 409 DFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTVEIISAPGARPNAAWLN----YVVT 464
           DFAY +H+ +G+ C+GA+VD    P +  +++G+ +EII++    P   WLN    Y+ T
Sbjct: 424 DFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNPNLGYIRT 483

Query: 465 SRARTKIRQVLKTMRREDSITLGRRLLNHALGEHSVNEIAPENISKVLSDLKIASMDDLL 524
           SRAR+KI+   K   R+ +I  G+ +L   L   S   +  ++ +  +    +ASMDDLL
Sbjct: 484 SRARSKIQHWFKQQDRDKNIIAGKEMLEAELARVS---LKIKDAAIAVERFNMASMDDLL 540

Query: 525 AAIGLGELMSIVIARRLLGN-----------ADELTEPS--KSGGN-KNKLPIRGAEGIL 570
           AAIG G++    +   +               +EL + S  KSG N + ++ + G   +L
Sbjct: 541 AAIGGGDVRLHQVVNHIQSKLRLDEASEEDAVEELVKKSQPKSGTNSRGQVEVNGVGNLL 600

Query: 571 LTFANCCHPIPDDHIIAHVSPGRGLVVHRETCPNVRGYQK-EPDKYMAVEWTKDYDQEFI 629
              A CC P+P D I+  ++ GRG+ VHR  C  V+   +  P++ + V W ++Y   + 
Sbjct: 601 SHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMRVHPERGVDVVWGENYSGGYR 660

Query: 630 TELKVDMHNRQGALAELTNVISKTGSNIHGL-STEERDGRLYTVTVLLTTKDRVHLAGIM 688
             L+V  H+R G L +LT+V++   SN+  + S+ +   +   + + L   +   L+ ++
Sbjct: 661 MRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNLDGLSRVL 720

Query: 689 RKIRTMPHALKVRR 702
            K+  +   ++ RR
Sbjct: 721 SKLSQVDSVIEARR 734