Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 135 a.a., DNA-directed RNA polymerase subunit omega from Sinorhizobium meliloti 1021

 Score = 58.9 bits (141), Expect = 2e-14
 Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 6/88 (6%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEE---- 56
          MARVTV+D ++K+ NRF+LVL+A+ RAR + S G    V  +NDK  V+ALREI +    
Sbjct: 1  MARVTVEDCIDKVENRFELVLLASHRAR-LVSQGAPITVDRDNDKNPVVALREIADETLS 59

Query: 57 -GLITKDVLDARERQEQQEQEAAELAAV 83
           G + +D++ + ++  + ++   + A++
Sbjct: 60 PGDLKEDLIHSLQKHVEVDEPEPDPASL 87