Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 93 a.a., DNA-directed RNA polymerase subunit omega (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (306), Expect = 9e-34
 Identities = 63/90 (70%), Positives = 75/90 (83%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MARVTV+DAV +IGNRFD++LVAARRARQ+   GKD +V EENDKPTVIALREIE GL+T
Sbjct: 1  MARVTVEDAVNQIGNRFDMILVAARRARQIAVQGKDPMVEEENDKPTVIALREIELGLVT 60

Query: 61 KDVLDARERQEQQEQEAAELAAVSSIMHNR 90
           D LDA ERQ  +E+EAAE+AAV++I   R
Sbjct: 61 ADTLDADERQTVREREAAEIAAVAAIAEGR 90