Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 77 a.a., DNA-directed RNA polymerase, omega subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.5 bits (114), Expect = 1e-11
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MAR+TV+D  ++I NRF LV +A +R +Q +  G + LV  +N K  V ALREI  G + 
Sbjct: 1  MARITVEDCQKRIDNRFLLVQMAIKRVQQYRE-GYEPLVDSKN-KEVVTALREIAAGKVM 58

Query: 61 KDVLDARERQEQQEQEAAE 79
           + L      E +E   AE
Sbjct: 59 PEDLALYRPAEGEEMPVAE 77