Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas fluorescens FW300-N2C3

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 108/499 (21%), Positives = 191/499 (38%), Gaps = 92/499 (18%)

Query: 13  ITFALYI------GIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGII 66
           ITF +YI      G+  +    + S++ + G  +  V   ++  A  MS    + + G I
Sbjct: 9   ITFVIYIAAMVLIGLMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAI 68

Query: 67  SFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYSRTARMVAV 121
              G   +   +G   G  L  L +A  LR          T+PD+   R+  ++  +  +
Sbjct: 69  YMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRII 128

Query: 122 FCAIFISF--TYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQV 179
              + + F   Y A  +     +F     +     +  G A    Y  +GG   +++T  
Sbjct: 129 SAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTDT 188

Query: 180 AQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTD 239
            Q  ++IFA ++  I   L+ TG      G  +T              LA+E    +  D
Sbjct: 189 VQATLMIFALILTPIIV-LLATG------GVDTTF-------------LAIEAKDPSSFD 228

Query: 240 GSKSMVDVFFICAALM---VGTAGLPHVIIRFFTVPKVSDA----RVSAGWALVFIAFLY 292
             K+   +  I  +LM   +G  G PH++ RF     V       R+S  W ++ +    
Sbjct: 229 MLKNTTFIGII--SLMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGG-- 284

Query: 293 TTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGD 352
           T A      A  +    + GP                                       
Sbjct: 285 TVAVGFFGIAYFSAHPDVAGP--------------------------------------- 305

Query: 353 ARNEMTINNDIIVLASPEIAKL--PNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLL 410
               +T N + + +   E+AKL    W+  +L +  LAA +ST +  LLV S+A++ D  
Sbjct: 306 ----VTENPERVFI---ELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFY 358

Query: 411 KKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIIL 470
           K   +   +  + +   R    L  + A  L  NP   V  +V++A+    A+F P +++
Sbjct: 359 KTFLRKSASQLELVWVGRAMVLLVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLI 418

Query: 471 GIFYKKMNKEGAIIGMLAG 489
            + +K M + GA+ G+L G
Sbjct: 419 SVIWKNMTRNGALAGILVG 437