Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., large component of pyruvate/D-alanine transporter (actP-like) (from data) from Pseudomonas stutzeri RCH2

 Score =  696 bits (1796), Expect = 0.0
 Identities = 356/587 (60%), Positives = 429/587 (73%), Gaps = 23/587 (3%)

Query: 4   QTW-TFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISM 62
           Q W   + VG +F LYIGIA+WARAGST EFYVAGGGVHPV NGMATAADWMSAASFISM
Sbjct: 3   QYWINMLFVGASFLLYIGIAVWARAGSTKEFYVAGGGVHPVTNGMATAADWMSAASFISM 62

Query: 63  AGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVAVF 122
           AG+I+  GY  +VYLMGWTGGYVLLA+ LAPYLRKFGKFTVPDFIGDR+YSR AR+ AV 
Sbjct: 63  AGLIASGGYATSVYLMGWTGGYVLLAMLLAPYLRKFGKFTVPDFIGDRFYSRGARLTAVV 122

Query: 123 CAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVAQY 182
           C I IS TYV GQM G GV F+RFLEV  + GI I  AIVF YAV GGMKGITYTQVAQY
Sbjct: 123 CLILISVTYVIGQMAGAGVAFSRFLEVSNSAGIWIAAAIVFAYAVFGGMKGITYTQVAQY 182

Query: 183 CVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTDGSK 242
            VLI A+ +PA+F ++ +TGNPIP  G   T   +   LL+KLD +  +LGF AYT    
Sbjct: 183 IVLIIAYTIPAVFIAMQLTGNPIPMFGMFGTHVDSGVPLLDKLDQVVTDLGFAAYTADVD 242

Query: 243 SMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTAPAVAAFA 302
           + +++F    +LM+GTAGLPHVIIRFFTVPKV+DAR SAGW LVFIA LY TAPAVA+ A
Sbjct: 243 NKLNMFLFTLSLMIGTAGLPHVIIRFFTVPKVADARWSAGWTLVFIALLYLTAPAVASMA 302

Query: 303 RVNMIDTI--NGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDAR------ 354
           R+N+++TI   GP  + +   + P W + WE TGL+KWEDKN DGR+    DA       
Sbjct: 303 RLNLVNTIYPEGPQAEAIRYEDRPEWVQTWERTGLIKWEDKNADGRVQMYNDANAKFTPT 362

Query: 355 --------NEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAIS 406
                   NE+T+NNDIIVLA+PEIA LP WV+ L+AAG +AAALSTAAGLLL IS+AIS
Sbjct: 363 ATERGWNGNELTVNNDIIVLANPEIANLPGWVIGLIAAGAIAAALSTAAGLLLAISSAIS 422

Query: 407 HDLLKKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFP 466
           HDL+K    P +++K E+LAAR++   AI+ A +LG+NPPGF AQVVA AFGLAAAS FP
Sbjct: 423 HDLIKTLINPKISEKNEMLAARLSMTAAILLATWLGLNPPGFAAQVVALAFGLAAASLFP 482

Query: 467 AIILGIFYKKMNKEGAIIGMLAGITFTAAYIIYFK---FINPAASV---PANWWFGISPE 520
           A+++GIF K++N +GA+ GML G+  TA YI  +    FI   AS+   P  WW GISP+
Sbjct: 483 ALMMGIFSKRVNSKGAVAGMLVGVISTAVYIFLYLGWFFIPGTASIPNTPDQWWMGISPQ 542

Query: 521 GIGTLGMCLNFVVAIVVNKFTAEVPQDVQDMVESIRYPKGAGAAHSH 567
             G +G  LNF VA  V+  T   PQ++QD+VES+R PKGAG A  H
Sbjct: 543 AFGAVGAMLNFAVAYAVSMATEAPPQEIQDLVESVRTPKGAGVALDH 589