Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 7e-25
 Identities = 116/519 (22%), Positives = 205/519 (39%), Gaps = 87/519 (16%)

Query: 1   MDIQTWTFI--LVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAAS 58
           M I T T I  L+ I   + IG   +    +  ++ + G  +      ++  A  MS   
Sbjct: 1   MSISTPTLITFLIYIAAMILIGFVAYRATKNFDDYILGGRSLGSFVTALSAGASDMSGWL 60

Query: 59  FISMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYS 113
            + + G I   G   +   +G   G  L  L +A  LR          T+PD+   R+  
Sbjct: 61  LMGLPGAIFVAGLSESWIAIGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFED 120

Query: 114 RTARMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINV----GIVIGMAIVFFYAVMG 169
            + RM+ +F A+ I   +      GV V  AR  E    V     + IG A    Y  +G
Sbjct: 121 ES-RMLRIFSALVILVFFTIYCASGV-VAGARLFESSFGVPYEYALWIGAAATILYVFIG 178

Query: 170 GMKGITYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLA 229
           G   +++T   Q  ++IFA L+  +F  L +            T+   +    +   GL 
Sbjct: 179 GFLAVSWTDTVQATLMIFALLITPVFVILALGDMGAAM----DTIATQNPAAFDMFSGL- 233

Query: 230 VELGFTAYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDA----RVSAGWAL 285
                        S V +  + A   +G  G PH+++RF     +       R+   W +
Sbjct: 234 -------------SFVAIISLLA-WGLGYFGQPHILVRFMAADSIKTIPNARRIGMAWMI 279

Query: 286 VFIAFLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDG 345
           + +A     A AV  F           P+  G  +                    +NG+ 
Sbjct: 280 LTLA----GAVAVGFFGIAYFA---GHPEQAGAVS--------------------QNGE- 311

Query: 346 RMFYSGDARNEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAI 405
           R+F              + +L +P       WV  ++ +G LAA +ST +  LLV S+A+
Sbjct: 312 RVFMEL-----------VKILFNP-------WVAGIILSGVLAAVMSTLSAQLLVSSSAL 353

Query: 406 SHDLLKKGFKPDMTDKQELLAAR-IAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASF 464
           + D  K   +   +  + +   R +   +A++  G +  NP   V  +V++A+    A+F
Sbjct: 354 TQDFYKAMLRKSASQTELVWVGRGMVLLIALIAIG-IASNPESKVLGLVSYAWAGFGAAF 412

Query: 465 FPAIILGIFYKKMNKEGAIIGMLAGITFTAAYIIYFKFI 503
            P +++ + +K+M + GA+ GML G       +++ +FI
Sbjct: 413 GPVVLISLLWKRMTRNGALAGMLVG---AVTVVVWKEFI 448