Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., sodium/proline symporter from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 7e-25
 Identities = 113/520 (21%), Positives = 210/520 (40%), Gaps = 89/520 (17%)

Query: 1   MDIQTWTFI--LVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAAS 58
           M++ T T I  ++ I   + IG   +    + S++ + G  +      ++  A  MS   
Sbjct: 1   MNVSTPTLITFVIYIAAMILIGFIAYRATKNFSDYILGGRSLGSFVTALSAGASDMSGWL 60

Query: 59  FISMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYS 113
            + + G I   G   +   +G   G  L  L +A  LR          T+PD+   R+  
Sbjct: 61  LMGLPGAIFVAGLSESWIAIGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFED 120

Query: 114 RTARMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINV----GIVIGMAIVFFYAVMG 169
            + RM+ +F A+ I   +      GV V  AR  E    +     + +G A    Y  +G
Sbjct: 121 ES-RMLRIFSALVILVFFTIYCASGV-VAGARLFESTFGMPYEYALWVGAAATILYVFIG 178

Query: 170 GMKGITYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLA 229
           G   +++T   Q  ++IFA LV  +F  L +        G   T   T            
Sbjct: 179 GFLAVSWTDTVQATLMIFALLVTPVFVILAL--------GDMGTAMAT------------ 218

Query: 230 VELGFTAYTDGSKSMVDVFFICA-ALMVGTAGLPHVIIRFFTVPKVSDA----RVSAGWA 284
           +E    A  D  + +  V  +   A  +G  G PH+++RF     +       R+   W 
Sbjct: 219 IEAQNPANFDMFRGLSFVAIVSLLAWGLGYFGQPHILVRFMAADSIKTIPNARRIGMTWM 278

Query: 285 LVFIAFLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGD 344
           ++ +A          A   + +    + P+  G  +                    +NG+
Sbjct: 279 ILTLA-------GAVAVGFLGIAYFADHPEQAGAVS--------------------QNGE 311

Query: 345 GRMFYSGDARNEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTA 404
            R+F              + +L +P       WV  ++ +G LAA +ST +  LLV S+A
Sbjct: 312 -RVFMEL-----------VKILFNP-------WVAGIILSGVLAAVMSTLSAQLLVSSSA 352

Query: 405 ISHDLLKKGFKPDMTDKQELLAAR-IAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAAS 463
           ++ D  K   + + +  + +   R +   +A++  G +  NP   V  +V++A+    A+
Sbjct: 353 LTQDFYKAMLRKNASQTELVWVGRGMVLLIALIAIG-IASNPDSKVLGLVSYAWAGFGAA 411

Query: 464 FFPAIILGIFYKKMNKEGAIIGMLAGITFTAAYIIYFKFI 503
           F P +++ + +K+M + GA++GML G       +++ +FI
Sbjct: 412 FGPVVLISLLWKRMTRNGALVGMLVG---AVTVVVWKEFI 448