Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., actP-like component of lactate uptake system (from data) from Shewanella amazonensis SB2B

 Score =  888 bits (2295), Expect = 0.0
 Identities = 429/572 (75%), Positives = 502/572 (87%), Gaps = 5/572 (0%)

Query: 1   MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFI 60
           MD++T T+++VG++FALYIGIAIW+RAGST EFYVAGGGV PV NGMATAADWMSAASFI
Sbjct: 1   MDVKTLTYLIVGLSFALYIGIAIWSRAGSTKEFYVAGGGVPPVMNGMATAADWMSAASFI 60

Query: 61  SMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVA 120
           S+AGI+SF+GYDG+VYLMGWTGGYVLLALC+APYLRKFGKFTVPDFIG+RYYS+ AR VA
Sbjct: 61  SLAGIVSFVGYDGSVYLMGWTGGYVLLALCMAPYLRKFGKFTVPDFIGERYYSQAARTVA 120

Query: 121 VFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVA 180
           V CAIFI FTY+AGQMRGVGVVF+RFLEVD++ G+ IGMA+VFFYAV+GGMKGITYTQVA
Sbjct: 121 VVCAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMAVVFFYAVLGGMKGITYTQVA 180

Query: 181 QYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTL-----TGTDDYLLNKLDGLAVELGFT 235
           QYCVLIFAF+VPAIF S+MMTG+ IPQ+GFG+ L      GT  YLL+KLDGL+ ELGF+
Sbjct: 181 QYCVLIFAFMVPAIFISVMMTGHIIPQLGFGAELIDAAGNGTGVYLLDKLDGLSTELGFS 240

Query: 236 AYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTA 295
            YT+GSKSM+DVF I AALMVGTAGLPHVI+RFFTVP+V DAR SAGWALVFIA +YTT 
Sbjct: 241 QYTEGSKSMIDVFAITAALMVGTAGLPHVIVRFFTVPRVKDARSSAGWALVFIAIMYTTV 300

Query: 296 PAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARN 355
           PA+AAF+RVNMI+TINGPD  GV    AP W +NWE TGL+KW+DKNGDG+M+Y+    N
Sbjct: 301 PALAAFSRVNMIETINGPDSTGVAYETAPGWIKNWEKTGLIKWDDKNGDGKMYYTKGDAN 360

Query: 356 EMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFK 415
           EM I+ DI+VLA+PEIA LP WV+AL+AAGGLAAALST+AGLLLVIST++SHDL+KKGF 
Sbjct: 361 EMNIDRDIMVLATPEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDLMKKGFA 420

Query: 416 PDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYK 475
           P+++DKQELL ARIAAA+ IV AGY GINPPGFVA VVAFAFGLAA+S FPAI++GIF K
Sbjct: 421 PNISDKQELLYARIAAAVGIVIAGYFGINPPGFVAAVVAFAFGLAASSLFPAIVMGIFSK 480

Query: 476 KMNKEGAIIGMLAGITFTAAYIIYFKFINPAASVPANWWFGISPEGIGTLGMCLNFVVAI 535
           KMNKEGAI GM+ G+ FTAAYI+YFKF+NPAA+VPANW FGISPEGIG +GM +NF VA+
Sbjct: 481 KMNKEGAIAGMVVGLGFTAAYIVYFKFVNPAANVPANWLFGISPEGIGMIGMLINFAVAV 540

Query: 536 VVNKFTAEVPQDVQDMVESIRYPKGAGAAHSH 567
           +V K T+ VP  V++MVE IR+PKGAG A  H
Sbjct: 541 IVAKLTSAVPAHVEEMVEGIRFPKGAGGAQDH 572