Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (266), Expect = 1e-27
 Identities = 110/511 (21%), Positives = 208/511 (40%), Gaps = 92/511 (18%)

Query: 7   TFILVGITFALYIGIAIWARAGSTSEF--YVAGGG-VHPVANGMATAADWMSAASFISMA 63
           T+I + I F   + I ++A   ST +   Y+ GG  V P    ++  A  MS    + + 
Sbjct: 5   TYISLAIYFLAMLAIGLFAYRRSTDDVSGYILGGRQVSPQVTALSAGASDMSGWMLMGLP 64

Query: 64  GIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGK-----FTVPDFIGDRYYSRTARM 118
           G +  +G++     +G   G ++  L +AP LR + +      T+P+F   R++  +  +
Sbjct: 65  GAMFLVGFETIYIALGLLLGALVNYLIVAPKLRVYTEVANNALTIPEFFAKRFHDPSCNV 124

Query: 119 VAVFCAIFISF--TYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITY 176
             +  AI + F   Y +  +   G +F    EV+  +G+VI + +V  Y ++GG   ++ 
Sbjct: 125 RIISAAIIVIFFTLYTSAGLVAGGKLFESAFEVNYELGLVITLGVVVSYTLLGGFLAVSL 184

Query: 177 TQVAQYCVLIFA-FLVPAIFTSLMMTGNPIPQIG------FGSTLTGTDDYLLNKLDGLA 229
           T   Q C++  A  LVP +        + +          FG  +      LL  +  L+
Sbjct: 185 TDFVQGCIMFVALILVPVVAYQEFSNADKMMNFAYESIPHFGEAMQNVT--LLGLISALS 242

Query: 230 VELGFTAYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIA 289
             LG+                         G PH+I+RF  +  VSD + +       I 
Sbjct: 243 WGLGY------------------------FGQPHIIVRFMAIRSVSDIKTAKN-----IG 273

Query: 290 FLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFY 349
             + T   + A A                              TGLV     N       
Sbjct: 274 MSWMTVTIIGALA------------------------------TGLVGIAYAN------- 296

Query: 350 SGDARNEMTINN-DIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHD 408
               + +M +++ + I +   E+   P  +   L A  LAA +ST +  LLV S++++ D
Sbjct: 297 ----KFDMKLSDPETIFIVFSELLFHP-LISGFLLAAILAAIMSTISSQLLVSSSSLTED 351

Query: 409 LLKKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAI 468
           + +   K + ++++ +   R   A   + A  L ++    +  +V+ A+    A+F P +
Sbjct: 352 IYRVVSKKEASEEEMVKLGRFGVAGVAIVASLLALDRSNSILSLVSNAWAGFGAAFGPLV 411

Query: 469 ILGIFYKKMNKEGAIIGMLAGITFTAAYIIY 499
           +  ++ K +  + A+ G++AG   T  + IY
Sbjct: 412 LFSLYKKNLTHKAAVAGIVAGAA-TVLFWIY 441