Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (316), Expect = 2e-33
 Identities = 118/485 (24%), Positives = 207/485 (42%), Gaps = 85/485 (17%)

Query: 17  LYIGIAIWA-RAGSTSEFYVAGG-GVHPVANGMATAADWMSAASFISMAGIISFIGYDGT 74
           L +GI +WA +A  + + Y+ GG  + P    ++  A  MS    + + G + ++G  G 
Sbjct: 17  LMMGIGLWAYKATDSVDDYILGGRSMGPAVTALSVGASDMSGWLLLGLPGAV-YLGGLGE 75

Query: 75  VYL-MGWTGGYVLLALCLAPYLRKFGKFT-----VPDFIGDRYYSRTARMV---AVFCAI 125
            ++ +G   G  L  L +A  LR + +FT     +PDF   R+  + + +    AV   +
Sbjct: 76  AWIGIGLVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFEDKQSVLKLVSAVTILV 135

Query: 126 FISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVAQYCVL 185
           F +F Y +  M G  ++F +   +D N+ ++IG  I+  Y  +GG   +++T   Q C++
Sbjct: 136 FFTF-YTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGGFFAVSWTDFFQGCLM 194

Query: 186 IFAFL-VPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTDGSKSM 244
           + A L VP    S   T N I  +         D  +L+ L      +G  +        
Sbjct: 195 LIALLIVPVTIFSQPETQNGIHSL---------DPAMLSLLSDNTTMIGLAS-------- 237

Query: 245 VDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTAPAVAAFARV 304
                   A  +G  G PH++ RF  +    D +VS       IA  +     + A A  
Sbjct: 238 ------LLAWGLGYFGQPHILSRFMAIGSADDLKVSRR-----IAMSWMIVALMGALA-- 284

Query: 305 NMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARNEMTINNDII 364
                                       TGL         G ++++     +  I+N   
Sbjct: 285 ----------------------------TGLA--------GTLYFA-----DQPIDNPET 303

Query: 365 VLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFKPDMTDKQEL 424
           +      A    W+  LL A  L+A +ST    LLV S+ I+ D  KK  +PD + K+ +
Sbjct: 304 IFIHLAHAAFNPWIGGLLVAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPDASSKELM 363

Query: 425 LAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKEGAII 484
           +  RI      V +G + +NP   V  +V++A+    A+F P +IL +F++  ++ GA+ 
Sbjct: 364 MIGRIGVLTIAVISGVIALNPESSVLSLVSYAWAGFGAAFGPVVILSLFWRGYSRNGAVA 423

Query: 485 GMLAG 489
            ++ G
Sbjct: 424 TIIVG 428