Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., actP-like component of L-lactate and L-malate uptake system (from data) from Shewanella loihica PV-4

 Score =  878 bits (2269), Expect = 0.0
 Identities = 426/572 (74%), Positives = 494/572 (86%), Gaps = 5/572 (0%)

Query: 1   MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFI 60
           MD+QT T+++VG TFALYIGIAIW+RAGST EFYVAGGGVHPV NGMATAADWMSAASFI
Sbjct: 1   MDVQTLTYLIVGFTFALYIGIAIWSRAGSTKEFYVAGGGVHPVMNGMATAADWMSAASFI 60

Query: 61  SMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVA 120
           S+AGI+SF+GYDG+VYLMGWTGGYVLLALC+APYLRKFGKFTVPDFIGDRYYS+ AR VA
Sbjct: 61  SLAGIVSFVGYDGSVYLMGWTGGYVLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVA 120

Query: 121 VFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVA 180
           V CAIFI FTY+AGQMRGVGVVF+RFLEV+++ G+ IGMA+VFFYAV+GGMKGITYTQVA
Sbjct: 121 VVCAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVA 180

Query: 181 QYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLT-----GTDDYLLNKLDGLAVELGFT 235
           QYCVLIFAF+VPAIF S+MMTG+ +PQ+GFG+ L       T  YLL KLDGL+ +LGF+
Sbjct: 181 QYCVLIFAFMVPAIFISVMMTGHILPQLGFGAELVDAAGNNTGVYLLEKLDGLSAQLGFS 240

Query: 236 AYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTA 295
            YT+GSK M+DVFFI  ALM GTAGLPHVI+RFFTVPKV DARVSAGWALVFIA +YTT 
Sbjct: 241 QYTEGSKGMIDVFFITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTI 300

Query: 296 PAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARN 355
           PA+AAF+RVNMI+TINGP+  GV    AP W +NWE TGL+KW+DKN DG+++Y+    N
Sbjct: 301 PALAAFSRVNMIETINGPESTGVAYETAPDWIKNWEKTGLIKWDDKNNDGKIYYAKGETN 360

Query: 356 EMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFK 415
           EM I+ DI+VLA+PEIA LP WV+AL+AAGGLAAALST+AGLLLVIST++SHDLLKK F 
Sbjct: 361 EMKIDRDIMVLATPEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDLLKKNFM 420

Query: 416 PDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYK 475
           PD++DKQELL ARIAAAL IV AGY GINPPGFVA VVA AFGLAA+S FPAII+GIF +
Sbjct: 421 PDISDKQELLYARIAAALGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSR 480

Query: 476 KMNKEGAIIGMLAGITFTAAYIIYFKFINPAASVPANWWFGISPEGIGTLGMCLNFVVAI 535
            MNKEGAI GM+ G+ F+A+YIIYFKF+NP  +  +NW FGISPEGIG LGM +NF VA 
Sbjct: 481 TMNKEGAIAGMVIGLLFSASYIIYFKFVNPGDNNASNWLFGISPEGIGMLGMIINFAVAF 540

Query: 536 VVNKFTAEVPQDVQDMVESIRYPKGAGAAHSH 567
           +V+K TA VPQ+V DMVESIR+PKGAG AH H
Sbjct: 541 IVSKVTAAVPQNVVDMVESIRFPKGAGEAHDH 572