Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis JJ

 Score =  129 bits (324), Expect = 3e-34
 Identities = 134/521 (25%), Positives = 213/521 (40%), Gaps = 92/521 (17%)

Query: 9   ILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISF 68
           +L+ +    Y+G   W    S  ++ V G  +HP    M+  A      +FIS A I+ F
Sbjct: 10  VLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGA------TFISTAAIVGF 63

Query: 69  IGYDGT--VYLMGWTGGYVLLALCLA-----PYLRKFGK----FTVPDFIGDRYYSRTAR 117
            G+ G   + L+  T   + L + +A        RK G      T P+ +  R+ S+  +
Sbjct: 64  GGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQ 123

Query: 118 MVA---VFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGI 174
             +   +FCA+ I   Y A  + G        L +  +V +++   I+  Y VMGG+KG+
Sbjct: 124 WFSGLLIFCAMPI---YAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGV 180

Query: 175 TYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLA----V 230
            YT   Q  ++ F  L     T  ++ G              T    ++ + GL      
Sbjct: 181 MYTDAFQGTIMFFGMLFLLYMTYDILGG------------VTTAHQAISNMSGLVPANLA 228

Query: 231 ELGFTAYTD----GSKS-MVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWAL 285
            +G   +T     GS      V  I   + +G    P +I+RF TV    +   +     
Sbjct: 229 SVGHAGWTSMPTFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGA 288

Query: 286 VFIAFLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDG 345
           VFI     TA  V   + V  ++T  G    G T +E                       
Sbjct: 289 VFILIATGTAYVVGTLSNVYFMNT-EGVLSIGATVSET---------------------- 325

Query: 346 RMFYSGDARNEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAI 405
             F +G++ + M +  +           +P W + +     LAAA+ST +       T+I
Sbjct: 326 --FPTGNSDSIMPLYIN---------KAMPEWFIYIFLVSLLAAAMSTISSQFHAQGTSI 374

Query: 406 SHDLL-----KKGFKPDMTDKQELLAARIAAALAIVGAGYLG-INPPGFVAQVVAFAFGL 459
             D+      KKG          ++  R+   +AIV A  LG I P G VA+  A  FGL
Sbjct: 375 GRDVYETICGKKGL-------NSVIITRLGIIVAIVIAAILGYILPGGIVARGTALFFGL 427

Query: 460 AAASFFPAIILGIFYKKMNKEGAIIGMLAGITFTAAYIIYF 500
            +A+F PA  LG+F+K+  KEGAI G+L G TF + + + F
Sbjct: 428 CSAAFLPAYALGLFWKRTTKEGAIAGLLTG-TFVSLFCLVF 467