Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., sodium:solute symporter from Methanococcus maripaludis JJ

 Score =  139 bits (351), Expect = 2e-37
 Identities = 133/560 (23%), Positives = 230/560 (41%), Gaps = 89/560 (15%)

Query: 6   WTFILVGITFALYIGIAIWA--RAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMA 63
           W ++ + +  A+ IGIA     R    S+F + G  V+P  +  +    + SA  FI  A
Sbjct: 2   WHYVFLAVYIAMIIGIATITKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFA 61

Query: 64  GIISFIGYDGTVYLM------GWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTAR 117
           G + +     T++++      G    + +L        ++ G  T+P F+  RY S+   
Sbjct: 62  GKMGWSFGIPTMWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLE 121

Query: 118 MVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYT 177
            +  F   F    Y A   +G+  +F  F    +N  I++  A+   Y   GG    T  
Sbjct: 122 SLTAFIIFFFLVPYSASIYKGLNFLFEGFGISPMNAYILMA-ALTAIYLYFGGFIAATLA 180

Query: 178 QVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFG--STLTGTDDYLLNKLDGLAVELGFT 235
              Q C+++   L+   F    +  NP     FG  S L+  D  L+  ++         
Sbjct: 181 DFVQGCIMVIGVLLMVFF----LGSNPEVGGFFGMLSNLSSIDPMLVTPIN--------- 227

Query: 236 AYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTA 295
                  S + +  +     +G+ GLP +I +F+T+ K   A VSA W     AF+ T  
Sbjct: 228 -----EASFIPIMGLALLTSIGSWGLPQMIHKFYTI-KSEKAAVSAKWVSTAFAFIITFG 281

Query: 296 PAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARN 355
            A      +  +  +  PD     AA            GL                    
Sbjct: 282 AAY-----IGTVSRVFYPDSASKAAA------------GLT------------------- 305

Query: 356 EMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFK 415
               + D+IV    EIA LP+WV AL+    ++A++ST A L+L  S+ +S D +K   K
Sbjct: 306 ----SPDMIVPKIMEIA-LPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLK 360

Query: 416 PDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYK 475
            D++D+  ++  R+   L +V +  L I P  +V  ++A ++GL +        LG+++K
Sbjct: 361 TDLSDRNTMILMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWK 420

Query: 476 KMNKEGAIIGMLAGITFTAAYIIYFKFINPAASVPANWWFGISP---EGIGTLGMCLNFV 532
           +  K+G   G+      T+A +I F            ++FGI+      +G+L M     
Sbjct: 421 RTTKQGVWAGI------TSALVIMF---------GGAYYFGINSVYMPAVGSLAMIAPIF 465

Query: 533 VAIVVNKFTAEVPQDVQDMV 552
           V + V+  T     +  D +
Sbjct: 466 VVMAVSLITKPFESEHLDYI 485