Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Sodium/pantothenate symporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 89/350 (25%), Positives = 139/350 (39%), Gaps = 79/350 (22%)

Query: 1   MDIQTWTFILVGITFALYIGIAIWARAGSTS---------EFYVAGGGVHPVANGMATAA 51
           M  Q  T + V +  AL  G+A+WAR  +           E+Y+ G  +      M   A
Sbjct: 1   MSAQFMTTVPVVLYLALSFGVALWARGRTAEGGSAKDIIEEYYIGGRSMGGFVLAMTIIA 60

Query: 52  DWMSAASFISMAGIISFIGYDGTVYLMGWTGGYVLLALCLAP---------------YLR 96
            + SA SF+         G  G  Y +G +  +VLLA+   P                 R
Sbjct: 61  SYTSAGSFV---------GGPGVAYRLGLS--WVLLAMIQVPTTFLTLGVLGKRFAIVAR 109

Query: 97  KFGKFTVPDFIGDRYYSRTARMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIV 156
           + G  T+ D++  RY S T   V + C+  +   ++A  +    +  AR  +       V
Sbjct: 110 RAGAVTLTDYLLARYRSHT---VVILCSAALLVFFMAAMLAQF-IGGARLFQTVTGYPYV 165

Query: 157 IGMAI----VFFYAVMGGMKGITYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQ----- 207
           +G+A+    V  Y  +GG + +  T   Q  V++ A +V  +  +++  G  + Q     
Sbjct: 166 VGLALFGVTVVLYTAVGGFRAVVVTDAVQGIVMVVAVVV--VLLAVIDAGGGMTQCIATL 223

Query: 208 --IGFG-STLTGTDD-----YLLN--KLDGLAVELGFTAYTD------GSKSMVDV---- 247
             I  G  T TG  D     ++L+   L GL V LG    T        S++M D     
Sbjct: 224 KAIDPGLITPTGPGDAVPQPFMLSFWVLVGLGV-LGLPQTTQRCMGYRDSRAMHDAMIIG 282

Query: 248 -----FFICAALMVGTAG---LPHVIIRFFTVPKVSDARVSAGWALVFIA 289
                F I  A + GT G   LP +      +P +    +S  WA VFIA
Sbjct: 283 TLLIGFMILCAHLAGTLGRAVLPDLPAGDLAMPSLIVQLLSPFWAGVFIA 332



 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%)

Query: 374 LPNWVVALLA--------AGGLAAALSTAAGLLLVISTAISHDLLKK--------GFKPD 417
           +P+ +V LL+        AG LAA +ST   +LL+ S AI  DL  +          +P 
Sbjct: 314 MPSLIVQLLSPFWAGVFIAGPLAAIMSTVDSMLLLASAAIVKDLYVRYRLGGDTSRLRPV 373

Query: 418 MTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKM 477
              +  + +  +   L  V A    + PP  +  +  FAFG   A F   ++LG+++++ 
Sbjct: 374 TMKRMSVASTAVIGVLVFVAA----MEPPDLLVWINLFAFGGLEAVFLWPLVLGLYWRRG 429

Query: 478 NKEGAIIGMLAGIT 491
           N  GAI  +L+G+T
Sbjct: 430 NATGAIASILSGVT 443