Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., Na+/solute symporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  678 bits (1750), Expect = 0.0
 Identities = 361/602 (59%), Positives = 430/602 (71%), Gaps = 39/602 (6%)

Query: 1   MDIQTWTFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFI 60
           MD  T   I+VG++FALY GIAIWARAGSTSEFY AG GV+PV NGMATAADWMSAASFI
Sbjct: 1   MDQTTLNIIVVGLSFALYFGIAIWARAGSTSEFYAAGRGVNPVVNGMATAADWMSAASFI 60

Query: 61  SMAGIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVA 120
           SMAG+I+F+GY  + +LMGWTGGYVL+AL LAPYLRKFGKFTVP+FIGDR+YS  AR+V 
Sbjct: 61  SMAGLIAFVGYSNSSFLMGWTGGYVLMALLLAPYLRKFGKFTVPEFIGDRFYSTKARVVG 120

Query: 121 VFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQVA 180
           V C I IS TYV GQM G GV F+RFLEV    G+V    +VF YAV+GGMKGITYTQVA
Sbjct: 121 VICLIVISTTYVIGQMTGAGVAFSRFLEVSSTTGLVTASCVVFVYAVLGGMKGITYTQVA 180

Query: 181 QYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTL----TGTDDYLLNKLDGLAVELGFTA 236
           QY VLI A+ +PAIF SL +TGNPIP +G  S +     G  + LL  LDGL  +LGF A
Sbjct: 181 QYVVLIIAYTIPAIFISLQLTGNPIPGLGLFSNMAPGQVGAGEPLLVTLDGLLTDLGFNA 240

Query: 237 YTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTAP 296
           YT GS   +   F   +LM+GTAGLPHVIIRFFTVP+V+DAR+SAGW LVFIA LY TAP
Sbjct: 241 YTTGSSPFLMALF-TLSLMIGTAGLPHVIIRFFTVPRVADARISAGWTLVFIALLYLTAP 299

Query: 297 AVAAFARVNMIDTI--NGPDMQGVTAAEAP-----TWYRNWESTGLVKWEDKNGDGRMFY 349
           AV A AR+N+ D +   G   + VT           W   W+ TGL+ WEDKNGDGR+ Y
Sbjct: 300 AVGAMARLNITDLMWPEGTQGEAVTIEMIQNDPEYAWMNTWQQTGLLGWEDKNGDGRIQY 359

Query: 350 SGDARNEMT---------------INNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTA 394
             DA   MT                N DI+VLA+PEIA LP WV+AL+AAGG+AAALSTA
Sbjct: 360 YNDANPSMTERAEAAGWQGNELTNFNRDILVLANPEIANLPGWVIALIAAGGIAAALSTA 419

Query: 395 AGLLLVISTAISHDLLKKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVA 454
           AGLLL IS+AISHDL+K  F P +++K ELLAARI+ A AIV A YLG+NPPGF AQVVA
Sbjct: 420 AGLLLAISSAISHDLIKTVFNPSISEKGELLAARISMAGAIVVATYLGLNPPGFAAQVVA 479

Query: 455 FAFGLAAASFFPAIILGIFYKKMNKEGAIIGMLAGITFTAAYI-----IYF----KFINP 505
            AFGLAAA+ FPA+++GIF K++N  GA  GML G+  T AY+     I+F     F+ P
Sbjct: 480 LAFGLAAATLFPALMMGIFSKRINASGATWGMLVGLISTCAYLFTYLGIFFVPGTNFLEP 539

Query: 506 AASVPANWWFGISPEGIGTLGMCLNFVVAIVVNKFTAEVPQDVQDMVESIRYPKGAGAAH 565
            AS   N+ FGI P   G +G  LNF VAI+V++ T E PQ++QD+VES+R P+GAGAA 
Sbjct: 540 TAS---NYLFGIPPTHFGPIGALLNFAVAILVSRATEEPPQEIQDLVESVRIPRGAGAAV 596

Query: 566 SH 567
            H
Sbjct: 597 DH 598