Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., L-arabinose/L-arabinobiose symporter (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 45/195 (23%), Positives = 92/195 (47%), Gaps = 13/195 (6%)

Query: 8   FILVGITFALYIGIAIWA---RAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAG 64
           ++++G+ F   IGI +W    +   ++++++ G     +A G +  A  + +   I +AG
Sbjct: 6   WLVIGVFFLALIGIIVWVVRQKQNDSADYFLGGRDATWLAIGASIFASNIGSEHLIGLAG 65

Query: 65  IISFIGYDGTVY-LMGWTGGYVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVAVFC 123
             +  G     + + GW    ++L     P+  +   +T+P+F+  RY  ++  +++V  
Sbjct: 66  AGASSGMAMAHWEIQGWM--ILILGWVFVPFYSRSMVYTMPEFLERRYNPQSRTILSVIS 123

Query: 124 AIFISFTYVAGQMRGVGVVFARFLEVDINVGI------VIGMAIVF-FYAVMGGMKGITY 176
            +    T VA  +   G+VF +   +    GI       IG+ ++   Y + GGMK + Y
Sbjct: 124 LVSYVLTKVAVTVYAGGLVFQQVFGIKELWGIDFFWIAAIGLVVLTALYTIFGGMKSVLY 183

Query: 177 TQVAQYCVLIFAFLV 191
           T V Q  +L+   L+
Sbjct: 184 TSVLQTPILLLGSLI 198