Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., sodium/proline symporter (RefSeq) from Shewanella sp. ANA-3

 Score = 97.8 bits (242), Expect = 9e-25
 Identities = 104/504 (20%), Positives = 202/504 (40%), Gaps = 78/504 (15%)

Query: 7   TFILVGITFALYIGIAIWARAGSTSEF--YVAGGG-VHPVANGMATAADWMSAASFISMA 63
           +++ + I F   + I ++A   ST +   Y+ GG  V P    ++  A  MS    + + 
Sbjct: 5   SYVSLAIYFIAMLAIGLFAYRKSTDDVSGYILGGRQVSPHVTALSAGASDMSGWMLMGLP 64

Query: 64  GIISFIGYDGTVYLMGWTGGYVLLALCLAPYLRKFGK-----FTVPDFIGDRY--YSRTA 116
           G +  +G++     +G   G ++  L +AP LR + +      T+P+F   R+     + 
Sbjct: 65  GAMFLVGFETLYIALGLLIGALINYLVVAPKLRVYTEVADNALTIPEFFAKRFGQADNSI 124

Query: 117 RMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITY 176
           R++A    +     Y +  +   G +F     ++ ++G+V+ +A+V  Y ++GG   ++ 
Sbjct: 125 RIIAAAIIVIFFTLYTSAGLVAGGKLFESAFGLNYDIGLVVTLAVVVSYTLLGGFLAVSL 184

Query: 177 TQVAQYCVLIFAF-LVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFT 235
           T   Q C++  A  LVP +      + + +    + S    TD      L GL   L + 
Sbjct: 185 TDFVQGCIMFVALVLVPFVAYQEFTSADRMMNFAYQSIPHFTDAMQNVTLLGLISSLSWG 244

Query: 236 AYTDGSKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVSDARVSAGWALVFIAFLYTTA 295
                               +G  G PH+I+RF  +  V+D + +       I   + T 
Sbjct: 245 --------------------LGYFGQPHIIVRFMAIRSVADIKTARR-----IGISWMTV 279

Query: 296 PAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARN 355
             + A A                              TGLV     N  G          
Sbjct: 280 TIIGALA------------------------------TGLVGIAYANKFGMKL------- 302

Query: 356 EMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLLKKGFK 415
               + + I +   E+   P  +   L A  LAA +ST +  LLV S++++ D+ +   K
Sbjct: 303 ---SDPETIFIVFSELLFHP-LISGFLLAAILAAIMSTISSQLLVSSSSLTEDIYRTLSK 358

Query: 416 PDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYK 475
              ++++ +   R   A   + A  L ++    +  +V+ A+    A+F P ++  ++  
Sbjct: 359 KQASEQEMVKMGRYGVAGVAIVATLLALDRSNSILSLVSNAWAGFGAAFGPLVLFSLYKA 418

Query: 476 KMNKEGAIIGMLAGITFTAAYIIY 499
            +  + AI G+++G   T  + IY
Sbjct: 419 NLTHKAAIAGIISG-ALTVLFWIY 441