Pairwise Alignments

Query, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 3e-29
 Identities = 103/382 (26%), Positives = 173/382 (45%), Gaps = 24/382 (6%)

Query: 16  LIGI-SVLLSPVSSKLGIPILLVFLAVGMLAGE-------DGI-GQIAFDNYPVAYLVSN 66
           L+GI S++   +  +L +P +L  L  G+L G        D I G + F        V +
Sbjct: 11  LVGILSIVCQWLGWRLRLPAILPLLLCGLLVGPVFNLLDPDAIFGDLLFP-------VIS 63

Query: 67  LALAIILLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWLFNLSLLQGVLVG 126
           L +A+IL +G +    +  R        L +LG  VT +  G+   ++   S    +L G
Sbjct: 64  LGVAVILFEGALTLNFSEIREHGRMVTHLVSLGTLVTWICIGVATHFIMGFSWELAMLFG 123

Query: 127 AIVGSTDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLGSAETNLSAG 186
           A+V  T    +  +L+      ++ + L  E    DP+   L V +   L  A     A 
Sbjct: 124 ALVVVTGPTVIVPMLRSIKPKSQLASILRWEGIVIDPIGALLAVLVFEYLTVAAE--PAS 181

Query: 187 FLLLSFIQQFGVGALLGLAGGWILWWLINRNQLPEGLYSILAVSGGLMIFALSNALGG-S 245
            +LLS     GVG  LG+  G+ +  ++ R  +P  L +   ++  L  F  SN L   S
Sbjct: 182 HVLLSLFSMLGVGLGLGVLFGYGIGVMLRRAWVPHYLKNTAVLTIMLGAFVASNLLQEES 241

Query: 246 GILSIYLTGLLLGNRPTRSRHAILNVLDGMTWLAQIGMFLVLGLLVTPSELMEIALPGLA 305
           G+L++ + G+ L N        I+   + +T L   G+F++L   +  + LM++   GLA
Sbjct: 242 GLLTVTVMGIWLANMRGVDIGEIIEFKETLTVLFISGLFILLAARLDSTALMQLGWQGLA 301

Query: 306 LAVGMILFARPIAVWIGLAPFKSFTAREKWFVSWVGLRG----AVPIILAVFPMMAGLPN 361
           L + ++  ARP++VW   A   S    +KWF+SWV  RG    AV  + A+      +  
Sbjct: 302 LLLVVMFIARPLSVWC-CAVGTSLPRADKWFLSWVAPRGIVAAAVSSLFAIKLERLEVAG 360

Query: 362 AQLYFNLAFFVVMVSLVVQGGT 383
           A     L F +++ ++V Q  T
Sbjct: 361 ADKIVPLVFLIIIGTVVSQSLT 382