Pairwise Alignments

Query, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  831 bits (2146), Expect = 0.0
 Identities = 417/573 (72%), Positives = 484/573 (84%)

Query: 1   MDAVTINSFFMIGALLIGISVLLSPVSSKLGIPILLVFLAVGMLAGEDGIGQIAFDNYPV 60
           MDA +INSFF+IGALL  +SVLLSP+SS+LGIPILL+FLAVG+LAGEDG G I FD+Y  
Sbjct: 1   MDADSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST 60

Query: 61  AYLVSNLALAIILLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWLFNLSLL 120
           AYLVSN ALAIILLDGGMRTRVASFRVA WP++SLAT GVA+TT +TG++A WLF+L  L
Sbjct: 61  AYLVSNFALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWL 120

Query: 121 QGVLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLGSAE 180
           QG+LVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESG+NDPMAVFLTVTLIA+L +  
Sbjct: 121 QGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGSNDPMAVFLTVTLIAILANVG 180

Query: 181 TNLSAGFLLLSFIQQFGVGALLGLAGGWILWWLINRNQLPEGLYSILAVSGGLMIFALSN 240
             LSA F+L+SFI+QFG+G LLGL GGW+LW L+N ++L EGLYSIL +SGGLMI+A SN
Sbjct: 181 AELSASFMLISFIKQFGLGVLLGLGGGWLLWKLVNVSKLAEGLYSILVLSGGLMIYATSN 240

Query: 241 ALGGSGILSIYLTGLLLGNRPTRSRHAILNVLDGMTWLAQIGMFLVLGLLVTPSELMEIA 300
            LGGSGILSIYL GL LGN+PTR RHAILNVLDGMTW++QIGMFLVLGLL+TPS+L++I 
Sbjct: 241 KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIW 300

Query: 301 LPGLALAVGMILFARPIAVWIGLAPFKSFTAREKWFVSWVGLRGAVPIILAVFPMMAGLP 360
           LPGLALA GMILFARP+AVW+ L PFKSF +R++WF+SWVGLRGAVPIILAVFPMMAGLP
Sbjct: 301 LPGLALAFGMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMMAGLP 360

Query: 361 NAQLYFNLAFFVVMVSLVVQGGTLTKAMSLAKVELPPKPEPISRTGVEIYPTSEWELFIY 420
            AQLYFNLAFFVV+VSL+VQG +LT A  LAKVELPPKP PISR+GVEIYP SEWE+F+Y
Sbjct: 361 GAQLYFNLAFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRSGVEIYPKSEWEVFVY 420

Query: 421 KLKADKWCIGEPLRNLFMPEGTRIAAVFRDNQLLHPSGSTELCEGDTLCVMAQERDLESL 480
            L   KWCIGEPL+ L MP+GTRIAAVFR+N LLHPSGST L  GD LCV+ QE+ LE+L
Sbjct: 421 CLSESKWCIGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLEAL 480

Query: 481 SRLFSEAPEKASLARFFGDFFLDIEAKLQDVALLYGLDLGELEADAKLKDLVLEHLGETP 540
           S LFS+APE   ++RFFGDFF+D E KL D+A +YGL L +      + DLV   LG  P
Sbjct: 481 SNLFSQAPETDEVSRFFGDFFIDTEVKLADLAPIYGLTLDDETGAMTVADLVALELGAHP 540

Query: 541 VLGDYFEWHGLQWVVADVVDWKVTKIGLRLPPE 573
           VLGD F W  L WVVA + + KVT +G+RLP +
Sbjct: 541 VLGDQFLWQSLHWVVAGLYEGKVTNVGIRLPAD 573