Pairwise Alignments

Query, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., sodium/hydrogen exchanger family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (249), Expect = 2e-25
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 12/376 (3%)

Query: 16  LIGI-SVLLSPVSSKLGIPILLVFLAVGMLAGED-GIGQIAFDNYPVAYLVSNLALAIIL 73
           LIG+ S+    +  KL +P +L  L  G+L G   GI         + + + +L +A+IL
Sbjct: 11  LIGVLSLFCQWLGWKLRLPAILPLLVCGLLLGPVFGILNPDAIFGDLLFPIISLGVAVIL 70

Query: 74  LDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWLFNLSLLQGVLVGAIVGSTD 133
            +G +       +        L ++G+ +T         +L + S    +L GA+V  T 
Sbjct: 71  FEGALTLNFKEIKDHGRMVTHLVSIGMLITWGCISTATYYLLDFSWEVALLFGALVVVTG 130

Query: 134 AAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLGSAETNLSAGFLLLSFI 193
              +  +L+      ++ + L  E    DP+   L V +   +  +    S     L  +
Sbjct: 131 PTVIVPMLRSIRPKSQLASILRWEGIVIDPIGALLAVLVFEYITVSGNQTSHVLYALGSM 190

Query: 194 QQFGVGALLGLAGGWILWWLINRNQLPEGLYSILAVSGGLMIFALSNALGG-SGILSIYL 252
              G+G  LG A G+++  +I  N LP  L +   ++  L IF  SN L   SG+L++ +
Sbjct: 191 LTMGLG--LGAAAGYLVGQVIRHNLLPHYLRNTAVLTLMLGIFVGSNLLQEESGLLTVTV 248

Query: 253 TGLLLGNRPTRSRHAILNVLDGMTWLAQIGMFLVLGLLVTPSELMEIALPGLALAVGMIL 312
            G+ L N        IL   + +T L    +F++L   +  + +M++   G+ +    +L
Sbjct: 249 MGIWLANMRGVDIAEILEFKETLTVLLISALFILLAARLDSNAMMDLGWGGVGVLAVTML 308

Query: 313 FARPIAVWI-GLAPFKSFTAREKWFVSWVGLRG----AVPIILAVFPMMAGLPNAQLYFN 367
            ARP+++W  G+    S +  +KWF+ W+  RG    AV  + A+    + +  A     
Sbjct: 309 IARPLSIWASGIG--TSLSKADKWFLCWIAPRGIVAAAVSSLFAIKLEASNVQGADAIVP 366

Query: 368 LAFFVVMVSLVVQGGT 383
           L F +++ ++V+Q  T
Sbjct: 367 LVFLIIIGTVVIQSLT 382