Pairwise Alignments

Query, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., sodium/hydrogen exchanger family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 100/397 (25%), Positives = 181/397 (45%), Gaps = 40/397 (10%)

Query: 12  IGALLIGISVLLSPVSSKLGIPILLVFLAVGMLAGEDGIGQIAFDNYPVAYLVSNLALAI 71
           I AL +G S+LL      LG  +   F+A        G+ ++ F       L+ N  L  
Sbjct: 33  ITALALGTSLLLLLGGKALGGNVYGYFVA--------GLEKLDFQA-----LLLNGMLGF 79

Query: 72  ILLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWL-----FNLSLLQGVLVG 126
           +L  G ++ R+   R   W  + LA +G  ++T + G L  +L       L+L   +L G
Sbjct: 80  LLFAGALQIRLKILRHQKWEILILAFVGTLLSTFIVGGLLYYLAPMFGLPLALSHCLLFG 139

Query: 127 AIVGSTDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLGSAETNLSAG 186
           A++  TD  AV ++LK     E +   +E ES  ND + + + V +  +  S E  L+  
Sbjct: 140 ALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLVIFVAISHLAFSTEP-LTFT 198

Query: 187 FLLLSFIQQFGVGALLGLAGGWIL--WWLINRNQLPEGLYSILAVSGGLMIFALSNALGG 244
            + L F+Q+   G L G   G +L  ++     +    L ++L  + G   + ++  LG 
Sbjct: 199 QISLLFVQEALGGVLYGAVLGLLLHHFFRYCEEETQLMLVTLLIPTAG---YVMAAELGV 255

Query: 245 SGILSIYLTGLLLGNRPTRSRHAILNVLDGMTWLAQIG------MFLVLGLLVTPSELME 298
           SG L++   G+++GN       A    +   T+ + I       +FL+LGLL+       
Sbjct: 256 SGPLAMVSAGIIIGNYSVPKFFARQERVKLYTFWSLIESFFNALLFLLLGLLLLLVTFKA 315

Query: 299 IALPGLALAVGMILFARPIAV---WIGLAPFKSFTAREKWFVSWVGLRGAVPIILA---- 351
                + LA+ ++L AR ++V   ++G    KS+    +  + W GLRG + + +A    
Sbjct: 316 PLWWFMLLAIPLVLTARAVSVFLPYMGFRLVKSYNPYAESILIWGGLRGGLALAMAMSLP 375

Query: 352 ---VFPMMAGLPNAQLYFNLAFFVVMVSLVVQGGTLT 385
              +     G+   +L   + + VV+ S+++QG ++T
Sbjct: 376 KGIIIDSQPGVELHELVLVMTYAVVVFSILIQGSSMT 412