Pairwise Alignments

Query, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

Subject, 835 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 89.7 bits (221), Expect = 4e-22
 Identities = 110/443 (24%), Positives = 186/443 (41%), Gaps = 39/443 (8%)

Query: 1   MDAVTINSFFMIGALLIGISVLLSPVSSKLGIPILLVFLAVGMLAGEDGIGQIAFDNY-- 58
           MD V +++      L+IG +    P++++L +P  ++   +G+L G   I  +  D    
Sbjct: 1   MDIVIVSAVIASLFLVIGAA---EPLAARLRLPFTVILAVLGILIGSGAIFFLRTDLTDA 57

Query: 59  --PVAYLVSNLALA----------IILLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLL 106
             PVA  +  L ++           +L    +   +      + P + LA + V V TL 
Sbjct: 58  LNPVAEAILGLPISSNVFLYVFLPTLLFQATLGMNLRRMLDDWVPIMVLAVVAVVVATLS 117

Query: 107 TGLLAMWLFNLSLLQGVLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAV 166
            G    W   L L+  +L+GAIV +TD +AV S+ +  S   R+   +E ES  ND  A+
Sbjct: 118 VGYALSWASTLPLVACLLIGAIVSTTDPSAVVSIFRSISAPRRLSRIIEGESLLNDAAAI 177

Query: 167 FLTVTLIAVLGSAETNLSAGFLLLSFIQQFGVGALLGLAGGWILWWLINRNQLPE-GLYS 225
            L    +  +     +   G  L  F      GAL G     +  W++   +  E  + S
Sbjct: 178 ALFGLFMGFVMMGVPDPRLGEALGQFPILIAGGALTGWLAAQVAVWIMAMFRAHELAMIS 237

Query: 226 ILAVSGGLMIFALSNALGGSGILSIYLTGLLL-----GNRPTRSRHAILNVLDGMTWLAQ 280
           +      L        +G SG++++   GL L     G  P ++   +  V D +   A 
Sbjct: 238 VSVALPYLAYIGSEQVVGASGVIAVVAAGLTLNLTGPGRLPPQAWANLGEVWDLLAHWAG 297

Query: 281 IGMFLVLGLLVTPSELMEIALPGLALAVGMILFARPIA---VWIGLAPFKSFTARE---- 333
             +F++  LL+ P  L  + L    L +G+++ A   A   V  GL P  +         
Sbjct: 298 ALIFILAALLI-PRLLEGVRLSDFVL-LGVVILAALAARAVVLFGLLPLLTLMRVSPHVE 355

Query: 334 ---KWFVSWVGLRGAVPIILAV-FPMMAGLPN--AQLYFNLAFFVVMVSLVVQGGTLTKA 387
              +  + W GLRGAV + LA+       +P    +L   LA    + +L+VQG TL   
Sbjct: 356 RPYRTAILWGGLRGAVTLALALAVTESIWVPGEVKRLVGILATGFTLFTLLVQGTTLRAV 415

Query: 388 MS-LAKVELPPKPEPISRTGVEI 409
           +  L   +L P  E +SR  + +
Sbjct: 416 IGWLGLDQLSPIDEAMSRQVIAV 438