Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

 Score =  200 bits (508), Expect = 2e-56
 Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 4/209 (1%)

Query: 3   STYTIIIADDHPLFRNALFQSVHMAISGA-NLLEADSLDALLTLLNKESEPDLLLLDLKM 61
           +TY I+IADDHPLFR+AL Q+V + +  A  L E  S+  L   L  +++ DL+LLDL M
Sbjct: 2   ATYEILIADDHPLFRSALHQAVTLGLGPAVRLTEVASIAELEVQLTAKADWDLVLLDLNM 61

Query: 62  PGANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQ 121
           PGA G SGL+ LR +YP +P+V++SA EE SV+ + +  GA GFIPKSS +  +  A+  
Sbjct: 62  PGAYGFSGLVLLRGQYPQIPVVMVSAQEEASVMVKAREFGASGFIPKSSSLEMIQKAVKA 121

Query: 122 VLNGEPYFPAHLLVDGFVGNDL---AEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSE 178
           VL+G+  +P        V  +    +E +A+LTPQQ++VL M+ +GLLNKQIAYELNVSE
Sbjct: 122 VLDGDVCWPPQAFEAVSVSEEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELNVSE 181

Query: 179 ATIKAHMTAIFRKLGVKNRTQAVILLKEM 207
           ATIKAH+TAIFRKL V+ RTQA +LL+++
Sbjct: 182 ATIKAHVTAIFRKLNVRTRTQAALLLQQL 210