Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  211 bits (537), Expect = 8e-60
 Identities = 113/209 (54%), Positives = 157/209 (75%), Gaps = 4/209 (1%)

Query: 3   STYTIIIADDHPLFRNALFQSVHMAIS-GANLLEADSLDALLTLLNKESEPDLLLLDLKM 61
           + Y IIIADDHPLFR+AL Q++ M +     L+EA S+  L T LN+ ++ DL+LLDL M
Sbjct: 2   AAYEIIIADDHPLFRSALQQALTMGLGENVRLVEAASIAELETFLNQGADWDLVLLDLNM 61

Query: 62  PGANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQ 121
           PGA G SGL+ LR +YP LP+V+ISA E+ +VV++ +  GA GFIPKSS + ++  A+  
Sbjct: 62  PGAYGFSGLVLLRGQYPHLPVVMISAQEDAAVVARSREFGASGFIPKSSSLETIQEAVRA 121

Query: 122 VLNGEPYFPAHLLVDGFVGND---LAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSE 178
           VL+G+ ++P+++     V ++    +  +A+LTPQQ++VL M+ DGLLNKQIAYELNVSE
Sbjct: 122 VLDGDVWWPSNIQDVANVSDEAKAASAGLASLTPQQFRVLTMVCDGLLNKQIAYELNVSE 181

Query: 179 ATIKAHMTAIFRKLGVKNRTQAVILLKEM 207
           ATIKAH+TAIFRKLGV+ RTQA +LL++M
Sbjct: 182 ATIKAHVTAIFRKLGVRTRTQAALLLQQM 210