Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  162 bits (411), Expect = 3e-45
 Identities = 86/207 (41%), Positives = 129/207 (62%), Gaps = 9/207 (4%)

Query: 5   YTIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGA 64
           Y I+IADDHPLFR A+   +      + +LE   LD+ L L  +  + DL+LLDL MPG 
Sbjct: 2   YKILIADDHPLFREAIHNVIRDGFPDSEILETADLDSALALTLEHDDLDLVLLDLNMPGM 61

Query: 65  NGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLN 124
           +G++GLI+LR+E P +P+V++SA ++  +V Q  ++GA GFI KSS    +  A+ Q+LN
Sbjct: 62  HGLNGLINLRNEAPTIPVVIVSAEQDKQIVLQAITYGAVGFITKSSPRAQMTDAIEQILN 121

Query: 125 GEPYFPAHLLVDGFVGNDLA---------EKVAALTPQQYKVLGMLSDGLLNKQIAYELN 175
           G  Y P+ ++      +  +         E + ALT +Q  VL  ++ G  NKQIAY L+
Sbjct: 122 GNVYLPSDIIRSQKPTSRHSHHNEQSIPPELLQALTRKQLLVLERMTKGESNKQIAYNLD 181

Query: 176 VSEATIKAHMTAIFRKLGVKNRTQAVI 202
           ++E T+KAH++AI RKL V NR QA++
Sbjct: 182 IAETTVKAHVSAILRKLNVHNRVQAIL 208