Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 5e-61
 Identities = 118/207 (57%), Positives = 154/207 (74%), Gaps = 8/207 (3%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNK-ESEPDLLLLDLKMPGAN 65
           +IIADDHPLFRNAL Q++  A +     EADS DAL  LL+K E + DL+LLDL+MPG++
Sbjct: 23  VIIADDHPLFRNALRQALSSAFADTRWFEADSADALQQLLDKPEVDYDLVLLDLQMPGSH 82

Query: 66  GMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNG 125
           G S LIHLRS YPD+P+VVISA E+   +S+   +G+ GFIPKS+ M +L  A++ VL G
Sbjct: 83  GYSTLIHLRSHYPDIPVVVISAHEDAQTISRAIHYGSAGFIPKSASMETLTEAMSAVLYG 142

Query: 126 EPYFPAHLLV-----DGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEAT 180
           + + P  + +     DG   + +A K+A LTPQQY+VL M ++GLLNKQIAY+L VSEAT
Sbjct: 143 DIWLPQDIELVKIEEDGT--DQVAGKLADLTPQQYRVLQMFAEGLLNKQIAYDLGVSEAT 200

Query: 181 IKAHMTAIFRKLGVKNRTQAVILLKEM 207
           IKAH TAIFRKLGV+NRTQAVI L+++
Sbjct: 201 IKAHATAIFRKLGVRNRTQAVIALQQL 227