Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (254), Expect = 5e-27
 Identities = 66/206 (32%), Positives = 108/206 (52%), Gaps = 6/206 (2%)

Query: 1   MDSTYTIIIADDHPLFRNALFQSVHMAISGANLLEADS-LDALLTLLNKESEPDLLLLDL 59
           M   Y++++ DDHPL R  + Q +          EA S LDAL  + N   EPD++LLDL
Sbjct: 1   MGKPYSVLVVDDHPLLRRGICQLIASDKDFTLFGEAGSGLDALSAVAN--DEPDIILLDL 58

Query: 60  KMPGANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAAL 119
            M G  G+  L  LR E     IV+++ S+    V ++   GA G++ K ++   L+  L
Sbjct: 59  NMKGMTGLDTLNGLRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLEKL 118

Query: 120 NQVLNGEPYFPAHL---LVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNV 176
              + G       +   L +     D  E + ALTP++ ++L  L++GL N+ I+ +L++
Sbjct: 119 KHAMLGHRVISEAVEEYLFELKNATDENEWIDALTPRELQILEQLAEGLSNRLISEQLHI 178

Query: 177 SEATIKAHMTAIFRKLGVKNRTQAVI 202
           SE T+K H+  + RK   K+RT+  +
Sbjct: 179 SEGTVKVHVKNLLRKANAKSRTEMAV 204