Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., Two Component Transcriptional Regulator, LuxR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  136 bits (343), Expect = 3e-37
 Identities = 88/218 (40%), Positives = 120/218 (55%), Gaps = 17/218 (7%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEP----DLLLLDLKMP 62
           I+IADDH LFR+ L   +        ++EA + D  L L++   +      L+L+DL MP
Sbjct: 3   ILIADDHELFRDGLRLVLSSLDPALEVVEACTYDEALRLVSTNGDGAEAFTLILVDLVMP 62

Query: 63  GANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQV 122
           G     GL  LR   P+ P+VV+SASE+  +V      GA GFIPK+S  R +I+AL  V
Sbjct: 63  GLPWSEGLQALRLAAPETPVVVLSASEDRKLVRDAVRLGASGFIPKTSSSRVMISALKLV 122

Query: 123 LNGEPYFPAHLLVD-------------GFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQ 169
           L+G  Y PA LL D             G  G       + LTP+Q +VL +L  G  NK+
Sbjct: 123 LSGGMYLPAALLDDEVIVEPVAVQAPAGGAGGPTGPTASRLTPRQGEVLRLLGQGKSNKE 182

Query: 170 IAYELNVSEATIKAHMTAIFRKLGVKNRTQAVILLKEM 207
           IA  L++SE T+K H+TAI + LGV NRT AVI  + +
Sbjct: 183 IARVLDLSEGTVKLHVTAILKALGVNNRTGAVIAAQRL 220