Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Two Component Transcriptional Regulator, LuxR family (NCBI) from Rhodospirillum rubrum S1H

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 24/221 (10%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEP-DLLLLDLKMPGAN 65
           +++ADDH + RNAL   +    +     EA    +L   L  E  P D++++DL+MPG  
Sbjct: 3   VLLADDHSIIRNALKFILQDLEAEVTFEEAREYPSLEDRLAAEGPPLDMVVMDLQMPGYE 62

Query: 66  GMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNG 125
           G++ +  +       PI V S  E    +  V   G   FIPKS+D   +   L  V  G
Sbjct: 63  GLAQIRRIVERAAPTPIAVFSMMEAVEDMRAVLRQGVRAFIPKSTDEALIGTLLKLVAGG 122

Query: 126 EPYFPAHLLVDGF-------------------VGNDLAE--KVAALTPQQYKVLGMLSDG 164
             Y PA   V G                    +G D  +  +++ LT +Q +VL ++S G
Sbjct: 123 GTYVPAQ--VSGISDCRFPPPLKVVLATDIRTIGEDFDDNPRLSDLTRRQREVLALMSQG 180

Query: 165 LLNKQIAYELNVSEATIKAHMTAIFRKLGVKNRTQAVILLK 205
           L N +I   L ++ +T+K H+T I + L   NRTQAV++ +
Sbjct: 181 LSNLEIGNRLGLNLSTVKTHVTGILKALDAGNRTQAVLMAR 221