Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (461), Expect = 5e-51
 Identities = 96/202 (47%), Positives = 136/202 (67%), Gaps = 1/202 (0%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGANG 66
           IIIADDHPLFR AL  ++        L EA+++ AL  +L +  + DLLLLDL +P A+G
Sbjct: 7   IIIADDHPLFRQALVNTLTTQFDQPMLFEAETVTALDEILTQHQDADLLLLDLNIPNAHG 66

Query: 67  MSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGE 126
            + L+++R+ YP + IVVIS  E+   V +  S GA GFIPKSS +  ++ A+N V+ G 
Sbjct: 67  FNTLVNIRNSYPHIGIVVISGQEDKVTVGKAMSFGAAGFIPKSSPVEQMVKAINAVMAGR 126

Query: 127 PYFPAHLL-VDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATIKAHM 185
            + P     +     + ++ K+A+L+P+Q+K+L M +DGLLNKQIAYEL +SEATIKAH 
Sbjct: 127 QWTPPGCEDLSAVTLDSMSSKIASLSPRQHKILMMFADGLLNKQIAYELGLSEATIKAHA 186

Query: 186 TAIFRKLGVKNRTQAVILLKEM 207
           +AIF KLGV  RTQAVI + ++
Sbjct: 187 SAIFLKLGVHTRTQAVIAMSQL 208