Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., two component transcriptional regulator, LuxR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  142 bits (359), Expect = 4e-39
 Identities = 78/205 (38%), Positives = 127/205 (61%), Gaps = 7/205 (3%)

Query: 8   IIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGANGM 67
           +I DDHPLF +AL  ++        +  AD++++ L+ L+  + PD+++LDL +P  NG+
Sbjct: 11  MIVDDHPLFLDALSMTLRTVSDIDEIATADTMESALSQLDGAT-PDVIVLDLNLPDVNGL 69

Query: 68  SGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGEP 127
            GLI L++  P  P+VV+S+  +  +++     GA GF+PK S       A + + NG  
Sbjct: 70  DGLIRLKTAVPSTPVVVVSSMADNRMITSTLRVGASGFVPKHSKREVFREAFDAIQNGTV 129

Query: 128 YFPAHLL--VDGFVGNDLAEKVAA----LTPQQYKVLGMLSDGLLNKQIAYELNVSEATI 181
           + P + +   D     + AE+  A    LT QQ ++L ++  G LNKQIAY+L+++E T+
Sbjct: 130 FTPENYVPNTDADSPQNNAEEALARLGLLTKQQARILQLICAGKLNKQIAYDLSIAETTV 189

Query: 182 KAHMTAIFRKLGVKNRTQAVILLKE 206
           KAH+TAI RKLGV++RTQAV++ +E
Sbjct: 190 KAHVTAIMRKLGVQSRTQAVLIAQE 214